Factsheet for HORVU4Hr1G060150.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G063940.1
HORVU3Hr1G090840.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02150.1	HORVU1Hr1G063940.1	AT4G10040.1	21798944
AT5G02150.1	HORVU3Hr1G090840.1	AT4G10040.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G208900.3	Wheat	mitochondrion	97.12	90.49
TraesCS4D01G209700.2	Wheat	cytosol, golgi, plastid	96.34	89.32
TraesCS4A01G095500.1	Wheat	mitochondrion	88.74	84.96
Os03t0271400-01	Rice	cytosol, extracellular, mitochondrion, plastid	84.56	84.11
EER92486	Sorghum	cytosol, extracellular, mitochondrion, plastid	84.29	83.85
Zm00001d028588_P001	Maize	cytosol, extracellular, mitochondrion, plastid	82.98	82.34
VIT_08s0007g00740.t01	Wine grape	nucleus	54.97	65.22
GSMUA_Achr10P...	Banana	cytosol	60.99	59.74
Bra029761.1-P	Field mustard	cytosol	56.81	59.13
CDY41617	Canola	cytosol	56.81	59.13
AT3G09350.1	Thale cress	cytosol	56.02	58.95
CDY44699	Canola	cytosol	56.54	58.86
AT3G53800.1	Thale cress	cytosol	55.5	58.4
CDX73975	Canola	cytosol	53.4	56.98
Solyc09g011030.2.1	Tomato	cytosol	59.16	56.93
HORVU5Hr1G113810.3	Barley	cytosol	56.02	56.76
CDY65836	Canola	cytosol	53.93	56.75
Bra007027.1-P	Field mustard	cytosol	53.93	56.75
KRH75713	Soybean	cytosol	57.33	56.74
PGSC0003DMT400022748	Potato	nucleus	58.9	56.68
CDY07920	Canola	cytosol	52.88	56.42
Bra001314.1-P	Field mustard	cytosol	52.88	56.42
AT5G02150.1	Thale cress	cytosol	47.64	56.17
CDX73524	Canola	cytosol	53.14	55.92
KRH65920	Soybean	cytosol	55.24	54.95
GSMUA_Achr7P15030_001	Banana	extracellular	20.16	50.66
CDX85186	Canola	mitochondrion	10.47	25.64
HORVU5Hr1G065400.2	Barley	cytosol	11.78	25.42
HORVU4Hr1G067060.5	Barley	cytosol	7.33	20.44
HORVU5Hr1G078080.1	Barley	plastid	22.77	18.47

Protein Annotations

EnsemblPlants:HORVU4Hr1G060150.6	EnsemblPlantsGene:HORVU4Hr1G060150	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:TOG	PANTHER:PTHR19316	PANTHER:PTHR19316:SF21	SEG:seg
SMART:SM01349	SUPFAM:SSF48371	UniParc:UPI000B465813	UniProt:A0A287P8X8	MapMan:19.1.5.4	:

Description

No Description!

Coordinates

chrchr4H:+:504136820..504139853

Molecular Weight (calculated)

42109.6 Da

IEP (calculated)

5.193

GRAVY (calculated)

-0.191

Length

382 amino acids

Sequence
(BLAST)

001: MAGDRMSWAR LLKWSLSYMG GARPSRDISE EERRWLAEAV ERHMAEDVVG RLREIALLMR TPLSVLEAQG ITPEDIEADL LAELQVHVES IDIANDLHSV
101: GGLVPVIRYL RNTNARIRAK AADVVTTVVQ NNPTSQQLVM EASGFEPLVS NFTSDPDLTA RIKALGALCS LIRNNKPGVA AFCLANGYAG LRDALSSESA
201: RFQRKALSLT HYLLSESHSD CSVFAQLGFP RLMMRLVSSD DSGVREAALG GLLELAKDTT LGNRSLLAEQ DRLRRLLWGR IQSIRMMAPE DLDAAREERQ
301: LVDSLWITCY HEPSTLHREG LVVLPGEESF EQPPDVAGRF FEPLRRAPLQ RAPPSPDERL DPGNGIMGGI MLLLGPAPGN SE

Best Arabidopsis Sequence Match ( AT3G09350.1 )
(BLAST)

001: MAKDGPNWDG LLKWSLSHAD GTRPTRQLSE EDRKWFMEAM QSQTVDVVKR MKEITLVMQT PEQVLVEHGV TPEDIQDLLD ELQEHVESID MANDLHSIGG
101: LVPLLSFLKN SHANIRAKAA DVVSTIVQNN PRSQELVMET NALESLLSNF TSDTDIHART QALGAISSLI RHNKPGVTAF KLANGYAGLR DALASDSVRF
201: QRKALNLLQY LLQEDDSDRS IATGLGFPRV MMHLASSDDA EIREAALRGL LELSREKNDG SSSIDKSDEK LRQLLEERIK GITLMSQEDL ETVKEERQLV
301: DLLWSICYNE PSSLREKGLV VLPGEDALPP DVASKLFEPP LRASAANRNA TEKKDEPMKL LGP

Arabidopsis Description

Fes1AFes1A [Source:UniProtKB/TrEMBL;Acc:Q84J81]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.