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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007027.1-P Field mustard cytosol 90.91 90.91
CDY65836 Canola cytosol 90.91 90.91
CDX73524 Canola cytosol 90.36 90.36
VIT_08s0007g00740.t01 Wine grape nucleus 61.71 69.57
AT3G09350.1 Thale cress cytosol 66.12 66.12
KRH65920 Soybean cytosol 66.94 63.28
AT5G02150.1 Thale cress cytosol 55.92 62.65
PGSC0003DMT400022748 Potato nucleus 68.04 62.22
KRH75713 Soybean cytosol 66.12 62.18
Solyc09g011030.2.1 Tomato cytosol 67.49 61.71
GSMUA_Achr10P... Banana cytosol 65.56 61.03
EER92486 Sorghum cytosol, extracellular, mitochondrion, plastid 61.71 58.33
Zm00001d028588_P001 Maize cytosol, extracellular, mitochondrion, plastid 61.16 57.66
Os03t0271400-01 Rice cytosol, extracellular, mitochondrion, plastid 60.61 57.29
HORVU4Hr1G060150.6 Barley mitochondrion 58.4 55.5
GSMUA_Achr7P15030_001 Banana extracellular 22.31 53.29
TraesCS4D01G209700.2 Wheat cytosol, golgi, plastid 59.5 52.43
TraesCS4B01G208900.3 Wheat mitochondrion 58.95 52.2
TraesCS4A01G095500.1 Wheat mitochondrion 54.55 49.62
CDX85186 Canola mitochondrion 18.73 43.59
AT3G51980.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 23.42 22.25
Protein Annotations
Gene3D:1.25.10.10MapMan:19.1.5.4EntrezGene:824547ProteinID:AEE79145.1InterPro:ARM-likeInterPro:ARM-type_fold
ArrayExpress:AT3G53800EnsemblPlantsGene:AT3G53800RefSeq:AT3G53800TAIR:AT3G53800RefSeq:AT3G53800-TAIR-GEnsemblPlants:AT3G53800.1
TAIR:AT3G53800.1EMBL:AY087709InterPro:ArmadilloUnigene:At.1396ProteinID:CAB88342.1Symbol:Fes1B
GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR000225InterPro:IPR011989RefSeq:NP_190948.1
InterPro:Nucleotide_exch_fac_Fes1PFAM:PF08609PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281PANTHER:PTHR19316PANTHER:PTHR19316:SF27UniProt:Q9M346SMART:SM00185SMART:SM01349
SUPFAM:SSF48371InterPro:TOGUniParc:UPI00000A888CSEG:seg::
Description
Fes1BFes1B [Source:UniProtKB/TrEMBL;Acc:Q9M346]
Coordinates
chr3:+:19930798..19932892
Molecular Weight (calculated)
40856.7 Da
IEP (calculated)
4.840
GRAVY (calculated)
-0.325
Length
363 amino acids
Sequence
(BLAST)
001: MANNGPNWDG LLKWSLSHSD GASSSSRISE EDRQWFVEAM QAHTIDSISR MKVISQIMKM PEQVLEAQGV TPDDLEGMLA ELQEHVESID LANDLHSIGG
101: LVPLLSYLKN SNAKIRAKSA DVLTTVVQNN PRSQQLVMEA NGFEPLLTNF IADPDIRVRT KALGAISSLI RNNQPGITAF RLANGYAGLR DALVSDTVRF
201: QRKALNLLHY LLQESNSDCK IVRDLGFPRI MIHLASNQDF EVREFALRGL LELAREESVR NLDRGDVNLR QLLEERTRRI IVMSDEDLCA AREERQLVDS
301: LWTVCYDEPS LLRERGLVYL PSDDELAPDV VRDRFEPPLR AWAARRHDET SESPVPLLLG PAP
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.