Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G02150.1 | KRH00982 | AT4G10040.1 | 21798944 |
| AT5G02150.1 | KRH40245 | AT4G10040.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75713 | Soybean | cytosol | 85.94 | 85.49 |
| VIT_08s0007g00740.t01 | Wine grape | nucleus | 67.45 | 80.43 |
| CDY41617 | Canola | cytosol | 71.61 | 74.93 |
| Bra029761.1-P | Field mustard | cytosol | 71.35 | 74.66 |
| CDY44699 | Canola | cytosol | 71.35 | 74.66 |
| PGSC0003DMT400022748 | Potato | nucleus | 76.3 | 73.8 |
| Solyc09g011030.2.1 | Tomato | cytosol | 76.04 | 73.55 |
| AT3G09350.1 | Thale cress | cytosol | 69.27 | 73.28 |
| CDY07920 | Canola | cytosol | 67.97 | 72.91 |
| CDX73975 | Canola | cytosol | 66.67 | 71.51 |
| Bra001314.1-P | Field mustard | cytosol | 66.41 | 71.23 |
| GSMUA_Achr10P... | Banana | cytosol | 70.31 | 69.23 |
| AT3G53800.1 | Thale cress | cytosol | 63.28 | 66.94 |
| CDY65836 | Canola | cytosol | 63.02 | 66.67 |
| Bra007027.1-P | Field mustard | cytosol | 63.02 | 66.67 |
| AT5G02150.1 | Thale cress | cytosol | 56.25 | 66.67 |
| CDX73524 | Canola | cytosol | 62.24 | 65.84 |
| Os03t0271400-01 | Rice | cytosol, extracellular, mitochondrion, plastid | 58.85 | 58.85 |
| EER92486 | Sorghum | cytosol, extracellular, mitochondrion, plastid | 57.55 | 57.55 |
| Zm00001d028588_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 57.29 | 57.14 |
| GSMUA_Achr7P15030_001 | Banana | extracellular | 22.4 | 56.58 |
| HORVU4Hr1G060150.6 | Barley | mitochondrion | 54.95 | 55.24 |
| TraesCS4B01G208900.3 | Wheat | mitochondrion | 55.47 | 51.95 |
| TraesCS4D01G209700.2 | Wheat | cytosol, golgi, plastid | 55.73 | 51.94 |
| TraesCS4A01G095500.1 | Wheat | mitochondrion | 52.6 | 50.63 |
| CDX85186 | Canola | mitochondrion | 14.58 | 35.9 |
| KRG89892 | Soybean | cytosol, extracellular, plastid | 16.67 | 27.23 |
| KRG89891 | Soybean | endoplasmic reticulum, extracellular | 7.03 | 18.12 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100779530 | MapMan:19.1.5.4 | EMBL:ACUP02001788 | InterPro:ARM-like | InterPro:ARM-type_fold |
| InterPro:Armadillo | ncoils:Coil | EnsemblPlantsGene:GLYMA_03G070400 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| UniProt:I1JM15 | InterPro:IPR000225 | InterPro:IPR011989 | EnsemblPlants:KRH65920 | ProteinID:KRH65920 | ProteinID:KRH65920.1 |
| InterPro:Nucleotide_exch_fac_Fes1 | PFAM:PF08609 | PANTHER:PTHR19316 | PANTHER:PTHR19316:SF27 | SMART:SM00185 | SMART:SM01349 |
| SUPFAM:SSF48371 | InterPro:TOG | UniParc:UPI0002336C61 | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:16489223..16492091
Molecular Weight (calculated)
42342.2 Da
IEP (calculated)
4.986
GRAVY (calculated)
-0.461
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKEGPNWDG LLKWSIAHSD GTSPTRNLSE EDRKWFMEAM QAQTIDVVKR MKEITLVMQT PEQVLKDQGV TPADIEDMLE ELQEHVESID MANDLHSIGG
101: LVPLLGYLKN SHANIRAMAA DVVTTIVQNN PRSQQLVMEA NGFEPLISNF SSDPDVTVRT KALGAISSLI RHNKPGITAF RLANGYAALK DALASENVRF
201: QRKALNLIHY LLHENNSDCN IVNELGFPRM LMHLASSEDS DVREAALRGL LQLAHNAKDG KDGNEKDSVK IKQLLQERIN NISLMSAEDL GVVREERQLV
301: DSLWSTCFNE PSSLREKGLL VLPGEDVPPP DVASKYFEPP LRSSTANPSS KKDPEKNEIP LLLGSGPSPT YTNNQGSNKG DASS
101: LVPLLGYLKN SHANIRAMAA DVVTTIVQNN PRSQQLVMEA NGFEPLISNF SSDPDVTVRT KALGAISSLI RHNKPGITAF RLANGYAALK DALASENVRF
201: QRKALNLIHY LLHENNSDCN IVNELGFPRM LMHLASSEDS DVREAALRGL LQLAHNAKDG KDGNEKDSVK IKQLLQERIN NISLMSAEDL GVVREERQLV
301: DSLWSTCFNE PSSLREKGLL VLPGEDVPPP DVASKYFEPP LRSSTANPSS KKDPEKNEIP LLLGSGPSPT YTNNQGSNKG DASS
001: MAKDGPNWDG LLKWSLSHAD GTRPTRQLSE EDRKWFMEAM QSQTVDVVKR MKEITLVMQT PEQVLVEHGV TPEDIQDLLD ELQEHVESID MANDLHSIGG
101: LVPLLSFLKN SHANIRAKAA DVVSTIVQNN PRSQELVMET NALESLLSNF TSDTDIHART QALGAISSLI RHNKPGVTAF KLANGYAGLR DALASDSVRF
201: QRKALNLLQY LLQEDDSDRS IATGLGFPRV MMHLASSDDA EIREAALRGL LELSREKNDG SSSIDKSDEK LRQLLEERIK GITLMSQEDL ETVKEERQLV
301: DLLWSICYNE PSSLREKGLV VLPGEDALPP DVASKLFEPP LRASAANRNA TEKKDEPMKL LGP
101: LVPLLSFLKN SHANIRAKAA DVVSTIVQNN PRSQELVMET NALESLLSNF TSDTDIHART QALGAISSLI RHNKPGVTAF KLANGYAGLR DALASDSVRF
201: QRKALNLLQY LLQEDDSDRS IATGLGFPRV MMHLASSDDA EIREAALRGL LELSREKNDG SSSIDKSDEK LRQLLEERIK GITLMSQEDL ETVKEERQLV
301: DLLWSICYNE PSSLREKGLV VLPGEDALPP DVASKLFEPP LRASAANRNA TEKKDEPMKL LGP
Arabidopsis Description
Fes1AFes1A [Source:UniProtKB/TrEMBL;Acc:Q84J81]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.