Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0150g00600.t01 | Wine grape | cytosol | 57.05 | 22.73 |
| Bra006889.1-P | Field mustard | extracellular | 55.03 | 21.58 |
| GSMUA_Achr11P... | Banana | extracellular | 56.38 | 21.16 |
| CDX73670 | Canola | extracellular | 53.02 | 20.79 |
| CDX78051 | Canola | extracellular | 52.35 | 20.53 |
| AT3G51980.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 51.01 | 19.9 |
| Os09t0512700-01 | Rice | extracellular, golgi | 54.36 | 19.76 |
| EER97031 | Sorghum | extracellular, golgi | 53.02 | 19.41 |
| TraesCS5A01G296200.1 | Wheat | mitochondrion | 53.02 | 19.17 |
| TraesCS5D01G303400.1 | Wheat | golgi | 52.35 | 18.93 |
| PGSC0003DMT400082480 | Potato | endoplasmic reticulum, extracellular, golgi | 47.65 | 18.88 |
| TraesCS5B01G295400.1 | Wheat | golgi | 52.35 | 18.75 |
| Solyc04g009320.2.1 | Tomato | golgi | 46.98 | 18.62 |
| PGSC0003DMT400034360 | Potato | endoplasmic reticulum, extracellular, vacuole | 46.31 | 18.4 |
| Zm00001d021120_P001 | Maize | extracellular, golgi, vacuole | 51.68 | 18.16 |
| EER96516 | Sorghum | extracellular, golgi | 50.34 | 18.16 |
| HORVU5Hr1G078080.1 | Barley | plastid | 51.68 | 16.35 |
| Zm00001d005544_P001 | Maize | extracellular, golgi | 36.91 | 15.28 |
| KRH75713 | Soybean | cytosol | 18.79 | 7.25 |
| KRH65920 | Soybean | cytosol | 18.12 | 7.03 |
| HORVU5Hr1G065400.2 | Barley | cytosol | 2.68 | 2.26 |
| HORVU4Hr1G067060.5 | Barley | cytosol | 0.67 | 0.73 |
| OQU89185 | Sorghum | cytosol | 0.0 | 0.0 |
| KRG89892 | Soybean | cytosol, extracellular, plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.1.1.2.6 | EMBL:ACUP02012304 | EnsemblPlantsGene:GLYMA_20G054300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003747 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006412 | GO:GO:0006415 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | UniProt:I1NE43 | EnsemblPlants:KRG89891 | ProteinID:KRG89891 |
| ProteinID:KRG89891.1 | InterPro:Nucleotide_exch_fac_Fes1 | PFAM:PF08609 | PANTHER:PTHR19316 | PANTHER:PTHR19316:SF18 | SignalP:SignalP-noTM |
| UniParc:UPI000295E6AF | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:12548453..12549365
Molecular Weight (calculated)
16307.3 Da
IEP (calculated)
4.212
GRAVY (calculated)
-0.275
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRTLCLSLL FFTAAVAAET GGAEPNLTSG GLLWSTAAEE SDLAPPPDDG GFSSLDGMLQ WAISHSDPGK LKESAEAQQR LPPSELYKRQ FEIKEIMEKM
101: KMPSDAELMR IAISDLNNVS TSLEDRHRAL QELLELVESI DNANGRCIL
101: KMPSDAELMR IAISDLNNVS TSLEDRHRAL QELLELVESI DNANGRCIL
001: MPTIFFFRYV FLLVVISLVG FSIAEKVNSS GGMVWSSVRD EAELVEDSGV VIGEQDQIDG GFSSLDGMLH WAIGHSDPAT LKEAAKDAEK MSLDELQKRQ
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SV06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.