Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012955_P001 | Maize | cytosol | 67.74 | 88.42 |
| Os03t0822700-01 | Rice | nucleus | 87.37 | 85.75 |
| TraesCS5B01G495500.1 | Wheat | cytosol | 86.56 | 84.51 |
| HORVU5Hr1G113810.3 | Barley | cytosol | 84.68 | 83.55 |
| TraesCS5D01G496000.1 | Wheat | cytosol | 83.87 | 81.89 |
| TraesCS5A01G482400.1 | Wheat | cytosol | 81.99 | 80.05 |
| EER92486 | Sorghum | cytosol, extracellular, mitochondrion, plastid | 59.68 | 57.81 |
| GSMUA_Achr8P20740_001 | Banana | cytosol | 8.06 | 53.57 |
| OQU89185 | Sorghum | cytosol | 16.67 | 26.72 |
| EER97031 | Sorghum | extracellular, golgi | 25.0 | 22.85 |
| EER96516 | Sorghum | extracellular, golgi | 23.12 | 20.82 |
Protein Annotations
| EnsemblPlants:KXG37246 | EnsemblPlantsGene:SORBI_3001G032800 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:Nucleotide_exch_fac_Fes1 | InterPro:TOG | ncoils:Coil | PANTHER:PTHR19316 |
| PANTHER:PTHR19316:SF27 | PFAM:PF08609 | ProteinID:KXG37246 | ProteinID:KXG37246.1 | SEG:seg | SMART:SM01349 |
| SUPFAM:SSF48371 | UniParc:UPI0001FCCE31 | UniProt:A0A1B6QH46 | MapMan:19.1.5.4 | : | : |
Description
hypothetical protein
Coordinates
chr1:-:2481787..2485139
Molecular Weight (calculated)
40763.4 Da
IEP (calculated)
4.843
GRAVY (calculated)
-0.505
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKDGGPDWN GLFKWSIAHG DGTKPPRALS EEDRKWFMEA MQANTIDVVK RMKEITQVMK TPEDVLQSQG VTPENIEDML DELQEHVESI DMANDLHSIG
101: GLDPLLGYLK NSNAGIRAKA AEVVSTIVQN NPKSQQLVME SNGLEPLLTN FKSDPSTNAR TKALGAISSL IRHNQPGISA FRLGNGYAGL KDALGSDDAR
201: LQRKALNLIQ YLLHNNKADR SVATELGLPK LMMHLASSDD SLVREAALSG LLELAQDKTS GNVLPDQDKL KDILKSRIEG ISVMDSDDLH AAREERQLVD
301: SLWKECYNEP SSLREKGLVV LPGEDAPQQL PPDVAGKMFE PPLRAWAAAR PAQEDDSDSG SGKKDPPLML KF
101: GLDPLLGYLK NSNAGIRAKA AEVVSTIVQN NPKSQQLVME SNGLEPLLTN FKSDPSTNAR TKALGAISSL IRHNQPGISA FRLGNGYAGL KDALGSDDAR
201: LQRKALNLIQ YLLHNNKADR SVATELGLPK LMMHLASSDD SLVREAALSG LLELAQDKTS GNVLPDQDKL KDILKSRIEG ISVMDSDDLH AAREERQLVD
301: SLWKECYNEP SSLREKGLVV LPGEDAPQQL PPDVAGKMFE PPLRAWAAAR PAQEDDSDSG SGKKDPPLML KF
001: MAKDGPNWDG LLKWSLSHAD GTRPTRQLSE EDRKWFMEAM QSQTVDVVKR MKEITLVMQT PEQVLVEHGV TPEDIQDLLD ELQEHVESID MANDLHSIGG
101: LVPLLSFLKN SHANIRAKAA DVVSTIVQNN PRSQELVMET NALESLLSNF TSDTDIHART QALGAISSLI RHNKPGVTAF KLANGYAGLR DALASDSVRF
201: QRKALNLLQY LLQEDDSDRS IATGLGFPRV MMHLASSDDA EIREAALRGL LELSREKNDG SSSIDKSDEK LRQLLEERIK GITLMSQEDL ETVKEERQLV
301: DLLWSICYNE PSSLREKGLV VLPGEDALPP DVASKLFEPP LRASAANRNA TEKKDEPMKL LGP
101: LVPLLSFLKN SHANIRAKAA DVVSTIVQNN PRSQELVMET NALESLLSNF TSDTDIHART QALGAISSLI RHNKPGVTAF KLANGYAGLR DALASDSVRF
201: QRKALNLLQY LLQEDDSDRS IATGLGFPRV MMHLASSDDA EIREAALRGL LELSREKNDG SSSIDKSDEK LRQLLEERIK GITLMSQEDL ETVKEERQLV
301: DLLWSICYNE PSSLREKGLV VLPGEDALPP DVASKLFEPP LRASAANRNA TEKKDEPMKL LGP
Arabidopsis Description
Fes1AFes1A [Source:UniProtKB/TrEMBL;Acc:Q84J81]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.