Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G060150.6 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G15160.1 | HORVU4Hr1G060150.6 | AT5G02150.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G473600.2 | Wheat | cytosol | 93.36 | 98.25 |
| TraesCS2A01G473900.1 | Wheat | cytosol | 92.86 | 97.73 |
| TraesCS2B01G497400.1 | Wheat | plastid | 92.52 | 97.38 |
| Os04t0626900-01 | Rice | plasma membrane | 87.38 | 91.96 |
| EES11468 | Sorghum | cytosol, peroxisome, plasma membrane, plastid | 84.72 | 89.01 |
| Zm00001d002235_P002 | Maize | cytosol, peroxisome, plasma membrane, plastid | 82.06 | 74.17 |
| GSMUA_Achr3P23110_001 | Banana | cytosol, extracellular | 23.09 | 73.55 |
| VIT_19s0177g00260.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 65.45 | 69.24 |
| PGSC0003DMT400037306 | Potato | cytosol, mitochondrion, plastid | 29.9 | 65.45 |
| KRH55679 | Soybean | cytosol, peroxisome, plasma membrane | 60.96 | 64.96 |
| CDX75812 | Canola | cytosol | 59.47 | 63.7 |
| Bra001585.1-P | Field mustard | cytosol | 58.97 | 63.17 |
| CDX82445 | Canola | cytosol | 58.97 | 63.17 |
| AT3G15160.1 | Thale cress | cytosol | 58.8 | 62.99 |
| Solyc10g006410.2.1 | Tomato | cytosol | 58.64 | 62.15 |
| PGSC0003DMT400037304 | Potato | cytosol | 18.77 | 55.66 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G106960.1 | EnsemblPlantsGene:HORVU2Hr1G106960 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0016020 | GO:GO:0044599 | InterPro:AP5Z1 | InterPro:ARM-type_fold |
| PANTHER:PTHR12181 | PANTHER:PTHR12181:SF29 | PFAM:PF14764 | SEG:seg | SUPFAM:SSF48371 | UniParc:UPI000B472EDE |
| UniProt:A0A287JC85 | MapMan:22.5.5.4.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:710947344..710954055
Molecular Weight (calculated)
65434.9 Da
IEP (calculated)
6.585
GRAVY (calculated)
0.016
Length
602 amino acids
Sequence
(BLAST)
(BLAST)
001: WTINLGPYSK PKSSRSLTHS PEADTTRATA MASPKLAAGD GSYDFHLRSL STASRDSAAA ADPASDPNLL QSVRMVFEMC KEAKGANDEM VARAFPVMNK
101: LFQRCAAAPT LSTASTGVLL LTILQFFLDF GEAVLHDADG SLKTFFRSCL SREFADPIVA ERTLEFLIAN KIKILNCFPT LVPQFFPLLL KLIASNGDRL
201: DKKFSEVLPL MMSAGSFLPL FLSLMDLPML VVALEKVERS SGTLIGSSLA TIQKSAAPEM LLALMDEAYT GSAIEDQSGN SGSDDSGPLD LADPMFLDLL
301: KDENDGIAAK HWTSPTISST LQAALNSPQS DRLKQSLKMA PRFLTVYFAT ALRDVNNSLL CALIPVVMSR YAAMFPDKDF SFEVRKKLSD FLLAAFQRSP
401: DIIALLKKPI TDRLGESHGN PAKMELALHL CWAIGEHGAG GINHKDVARE LFENLELLLY ENLATSRLGL SQDPGFDSMG ASSRKSSQAR LLCFVVTAIA
501: KLATCHNELL PRARVSLAKV ARSRTSDRRV WQRACDYLGL MNEPAICLSV LGPSTAQGNG PGIVNWSEGA TKMVAHIPFY LLAEQKGPPS HDFSYSDLLP
601: AE
101: LFQRCAAAPT LSTASTGVLL LTILQFFLDF GEAVLHDADG SLKTFFRSCL SREFADPIVA ERTLEFLIAN KIKILNCFPT LVPQFFPLLL KLIASNGDRL
201: DKKFSEVLPL MMSAGSFLPL FLSLMDLPML VVALEKVERS SGTLIGSSLA TIQKSAAPEM LLALMDEAYT GSAIEDQSGN SGSDDSGPLD LADPMFLDLL
301: KDENDGIAAK HWTSPTISST LQAALNSPQS DRLKQSLKMA PRFLTVYFAT ALRDVNNSLL CALIPVVMSR YAAMFPDKDF SFEVRKKLSD FLLAAFQRSP
401: DIIALLKKPI TDRLGESHGN PAKMELALHL CWAIGEHGAG GINHKDVARE LFENLELLLY ENLATSRLGL SQDPGFDSMG ASSRKSSQAR LLCFVVTAIA
501: KLATCHNELL PRARVSLAKV ARSRTSDRRV WQRACDYLGL MNEPAICLSV LGPSTAQGNG PGIVNWSEGA TKMVAHIPFY LLAEQKGPPS HDFSYSDLLP
601: AE
001: MSDQEGDWDF YLRILSNSAR DSTDPASDPS ILQSVKKLHG FCKMEKSDDL VARIYPQFNK VFHRSVASLS QSESGASKGL LLLAILQFFL DFGDMVLHDS
101: DPSLRTFFRS CLSREFSDAA VAEATCEFLV VNQRKLLASF PNLLPQFFPL LLKLIAWNWE KLEKSFLKIF PGLISPGSFL PLFPSIVDLP ILVVALEKVE
201: RSSGSGSRVG GSIASIQKSA APEMLLALMD EAYTGSTIGD GGDDSESEDN NTIDVADPLF LELLKDENDG LAERHRASPT LNAALQAAAS GPRSERMKQT
301: LKIAPRLLDV YFSVTLRDAN DSLICALIPL LMTRNSTMFP DKIFSHEIRR RLLEFVLAAF QRSPNFIALL KKPIIDRLGE AYDDVAKREL ALQLCWAIGE
401: YGGGGESHKE AARELFESLE LLVYENLSSS RLGLRQESGN GSRRTTQSRL LCFVVTAIAK LATYHRELLP RARVALGKVV KSRISDARVW RRAHDYLGLM
501: NEPGICWSVL GPSRVSEKRF PGTVNWSEGG QKMVAHIPFH ILSEQGGPPF HDFAFSDIIP KN
101: DPSLRTFFRS CLSREFSDAA VAEATCEFLV VNQRKLLASF PNLLPQFFPL LLKLIAWNWE KLEKSFLKIF PGLISPGSFL PLFPSIVDLP ILVVALEKVE
201: RSSGSGSRVG GSIASIQKSA APEMLLALMD EAYTGSTIGD GGDDSESEDN NTIDVADPLF LELLKDENDG LAERHRASPT LNAALQAAAS GPRSERMKQT
301: LKIAPRLLDV YFSVTLRDAN DSLICALIPL LMTRNSTMFP DKIFSHEIRR RLLEFVLAAF QRSPNFIALL KKPIIDRLGE AYDDVAKREL ALQLCWAIGE
401: YGGGGESHKE AARELFESLE LLVYENLSSS RLGLRQESGN GSRRTTQSRL LCFVVTAIAK LATYHRELLP RARVALGKVV KSRISDARVW RRAHDYLGLM
501: NEPGICWSVL GPSRVSEKRF PGTVNWSEGG QKMVAHIPFH ILSEQGGPPF HDFAFSDIIP KN
Arabidopsis Description
AP-5 complex subunit zeta-1 [Source:UniProtKB/TrEMBL;Acc:Q8H1F1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.