Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d028588_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G15160.1 | Zm00001d028588_P001 | AT5G02150.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11468 | Sorghum | cytosol, peroxisome, plasma membrane, plastid | 79.13 | 91.97 |
| Os04t0626900-01 | Rice | plasma membrane | 75.38 | 87.76 |
| TraesCS2A01G473900.1 | Wheat | cytosol | 74.02 | 86.19 |
| TraesCS2D01G473600.2 | Wheat | cytosol | 74.02 | 86.19 |
| TraesCS2B01G497400.1 | Wheat | plastid | 73.57 | 85.66 |
| HORVU2Hr1G106960.1 | Barley | plastid | 74.17 | 82.06 |
| GSMUA_Achr3P23110_001 | Banana | cytosol, extracellular | 19.22 | 67.72 |
| VIT_19s0177g00260.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 55.41 | 64.85 |
| KRH55679 | Soybean | cytosol, peroxisome, plasma membrane | 52.25 | 61.59 |
| CDX75812 | Canola | cytosol | 51.5 | 61.03 |
| AT3G15160.1 | Thale cress | cytosol | 51.35 | 60.85 |
| PGSC0003DMT400037306 | Potato | cytosol, mitochondrion, plastid | 25.08 | 60.73 |
| CDX82445 | Canola | cytosol | 51.2 | 60.68 |
| Bra001585.1-P | Field mustard | cytosol | 51.05 | 60.5 |
| Solyc10g006410.2.1 | Tomato | cytosol | 50.75 | 59.51 |
| PGSC0003DMT400037304 | Potato | cytosol | 16.97 | 55.66 |
Protein Annotations
| EnsemblPlants:Zm00001d002235_P002 | EnsemblPlants:Zm00001d002235_T002 | EnsemblPlantsGene:Zm00001d002235 | EntrezGene:100279312 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0016020 | GO:GO:0044599 | InterPro:AP5Z1 | PANTHER:PTHR12181 |
| PANTHER:PTHR12181:SF29 | PFAM:PF14764 | ProteinID:ONM13448.1 | SEG:seg | UniParc:UPI000842C070 | UniProt:A0A1D6DXS2 |
| MapMan:22.5.5.4.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:8470331..8477172
Molecular Weight (calculated)
72888.3 Da
IEP (calculated)
6.156
GRAVY (calculated)
0.136
Length
666 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPDLAAGD GSYDFHLRSL SAASRDSAAA SDPASDPNLL QSVRRVCEMC RTAKEAKDEM VARAFPVMGK LFQRCAAAPT QAVASTGVLL LTILQFFLDF
101: GEAVLHDADG SLKTFFRSCL SREFADPIVA ERTVEFLVTN KTKILSSFPN LIPQVPTLEI FTYLELTIPT SYLSIFYVNG GGGPYMYFFT NRSKEIFTIQ
201: EAVGQKEYLS SLPIFHIRLN LVNTCQCLCI LVYTQFYPLL LKLIASNGER LENKFSEVLP LMMSAGSFLP LFLSLMDLPM LVVALEKVER SSGTLIGSSI
301: ATIQKSAAPE MLLALMDEAY TGSAVEEPSG NSGSDDSGPL DLTDPMFLDL LKDENDGIAA KHWISPTISS TLQAAFNSPQ SDRLKQSLEM APRFLTLYFA
401: TALRDVNDSL LCALIPVVMS RYAAMFPDKV FSFKVRERLS DFILAAFQRS PNIIAVLKKP ITDRLGEAHD NLAKASISFK FVLLISMQTE LALHLCWAIG
501: EHGAGGVGHK DVARELFENL ELLLYENLAT SRLGLSQEPG SDSMGASSRK SSQARLLCFV VTAIAKLATC HSELLPRARV SLGKVARSRT SDRRVWQRAC
601: DYLGLMNEPA ICLSVLGPST AQGNGPGIVN WSEGGTKMVH RLIIFHLPTS SQQNEENICM SALVQA
101: GEAVLHDADG SLKTFFRSCL SREFADPIVA ERTVEFLVTN KTKILSSFPN LIPQVPTLEI FTYLELTIPT SYLSIFYVNG GGGPYMYFFT NRSKEIFTIQ
201: EAVGQKEYLS SLPIFHIRLN LVNTCQCLCI LVYTQFYPLL LKLIASNGER LENKFSEVLP LMMSAGSFLP LFLSLMDLPM LVVALEKVER SSGTLIGSSI
301: ATIQKSAAPE MLLALMDEAY TGSAVEEPSG NSGSDDSGPL DLTDPMFLDL LKDENDGIAA KHWISPTISS TLQAAFNSPQ SDRLKQSLEM APRFLTLYFA
401: TALRDVNDSL LCALIPVVMS RYAAMFPDKV FSFKVRERLS DFILAAFQRS PNIIAVLKKP ITDRLGEAHD NLAKASISFK FVLLISMQTE LALHLCWAIG
501: EHGAGGVGHK DVARELFENL ELLLYENLAT SRLGLSQEPG SDSMGASSRK SSQARLLCFV VTAIAKLATC HSELLPRARV SLGKVARSRT SDRRVWQRAC
601: DYLGLMNEPA ICLSVLGPST AQGNGPGIVN WSEGGTKMVH RLIIFHLPTS SQQNEENICM SALVQA
001: MSDQEGDWDF YLRILSNSAR DSTDPASDPS ILQSVKKLHG FCKMEKSDDL VARIYPQFNK VFHRSVASLS QSESGASKGL LLLAILQFFL DFGDMVLHDS
101: DPSLRTFFRS CLSREFSDAA VAEATCEFLV VNQRKLLASF PNLLPQFFPL LLKLIAWNWE KLEKSFLKIF PGLISPGSFL PLFPSIVDLP ILVVALEKVE
201: RSSGSGSRVG GSIASIQKSA APEMLLALMD EAYTGSTIGD GGDDSESEDN NTIDVADPLF LELLKDENDG LAERHRASPT LNAALQAAAS GPRSERMKQT
301: LKIAPRLLDV YFSVTLRDAN DSLICALIPL LMTRNSTMFP DKIFSHEIRR RLLEFVLAAF QRSPNFIALL KKPIIDRLGE AYDDVAKREL ALQLCWAIGE
401: YGGGGESHKE AARELFESLE LLVYENLSSS RLGLRQESGN GSRRTTQSRL LCFVVTAIAK LATYHRELLP RARVALGKVV KSRISDARVW RRAHDYLGLM
501: NEPGICWSVL GPSRVSEKRF PGTVNWSEGG QKMVAHIPFH ILSEQGGPPF HDFAFSDIIP KN
101: DPSLRTFFRS CLSREFSDAA VAEATCEFLV VNQRKLLASF PNLLPQFFPL LLKLIAWNWE KLEKSFLKIF PGLISPGSFL PLFPSIVDLP ILVVALEKVE
201: RSSGSGSRVG GSIASIQKSA APEMLLALMD EAYTGSTIGD GGDDSESEDN NTIDVADPLF LELLKDENDG LAERHRASPT LNAALQAAAS GPRSERMKQT
301: LKIAPRLLDV YFSVTLRDAN DSLICALIPL LMTRNSTMFP DKIFSHEIRR RLLEFVLAAF QRSPNFIALL KKPIIDRLGE AYDDVAKREL ALQLCWAIGE
401: YGGGGESHKE AARELFESLE LLVYENLSSS RLGLRQESGN GSRRTTQSRL LCFVVTAIAK LATYHRELLP RARVALGKVV KSRISDARVW RRAHDYLGLM
501: NEPGICWSVL GPSRVSEKRF PGTVNWSEGG QKMVAHIPFH ILSEQGGPPF HDFAFSDIIP KN
Arabidopsis Description
AP-5 complex subunit zeta-1 [Source:UniProtKB/TrEMBL;Acc:Q8H1F1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.