CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92486

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15160.1	EER92486	AT5G02150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0626900-01	Rice	plasma membrane	90.92	91.08
TraesCS2A01G473900.1	Wheat	cytosol	89.18	89.34
TraesCS2D01G473600.2	Wheat	cytosol	89.18	89.34
TraesCS2B01G497400.1	Wheat	plastid	88.66	88.81
HORVU2Hr1G106960.1	Barley	plastid	89.01	84.72
Zm00001d002235_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	91.97	79.13
GSMUA_Achr3P23110_001	Banana	cytosol, extracellular	24.61	74.6
VIT_19s0177g00260.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.02	67.49
PGSC0003DMT400037306	Potato	cytosol, mitochondrion, plastid	31.41	65.45
KRH55679	Soybean	cytosol, peroxisome, plasma membrane	63.53	64.42
CDX75812	Canola	cytosol	61.43	62.63
AT3G15160.1	Thale cress	cytosol	61.26	62.46
Bra001585.1-P	Field mustard	cytosol	60.91	62.1
CDX82445	Canola	cytosol	60.91	62.1
Solyc10g006410.2.1	Tomato	cytosol	61.26	61.8
PGSC0003DMT400037304	Potato	cytosol	19.55	55.17

Protein Annotations

EnsemblPlants:EES11468	EnsemblPlantsGene:SORBI_3006G223200	EntrezGene:8066824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0016020	GO:GO:0044599	InterPro:AP5Z1	PANTHER:PTHR12181	PANTHER:PTHR12181:SF29
PFAM:PF14764	ProteinID:EES11468	ProteinID:EES11468.1	RefSeq:XP_002447140.1	SEG:seg	unigene:Sbi.6449
UniParc:UPI0001A86CC9	UniProt:C5YGI1	MapMan:22.5.5.4.1	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:56936080..56941298

Molecular Weight (calculated)

62274.2 Da

IEP (calculated)

5.533

GRAVY (calculated)

0.100

Length

573 amino acids

Sequence
(BLAST)

001: MASPELAAGD GSYDFHLRSL SAASRDSAAA FDPASDPNLL QSVRRVCEMC RTAKEAKDEM VARAFPVMGK LFQRCAAAPT QAVASTGVLL LTILQFFLDF
101: GEAVLHDADG SLKTFFRSCL SREFADPIVA ECTVEFLVTN KTKILSSFPN LIPQFYPLLL KLVASNGERL ESKFSQVLPL MMSAGSFLPL FLSLMDLPML
201: VVALEKVERS SGTLIGSSIA TIQKSAAPEM LLALMDEAYT GSAIEEPSGN SGSDDSGALD LADPMFLDLL KDENDGIAAK HWISPTISST LQAAFNSPQS
301: DRLKQSLEMA PRFLTLYFAT ALRDVNDSLL CALIPVVMSR YAAMFPDKVF SFKVRKRLSD FILAAFQRSP DIIAVLKKPI TDRLGEAHDN PAKTELALHL
401: CWAIGEHGAG GIDRKDVARE LFENLELLLY ENLATSRLAL SQEPGSDSMG ASSRKSSQAR LLCFVVTAIA KLATCHSELL PRARVSLGKV VARSQTLDRR
501: VWQRACDYLG LMNEPAICLS VLGPSTAQGN GPGIVNWSEG GTKMVAHVPF YLLAEQKGPP FHDFSFTDLL PTE

Best Arabidopsis Sequence Match ( AT3G15160.1 )
(BLAST)

001: MSDQEGDWDF YLRILSNSAR DSTDPASDPS ILQSVKKLHG FCKMEKSDDL VARIYPQFNK VFHRSVASLS QSESGASKGL LLLAILQFFL DFGDMVLHDS
101: DPSLRTFFRS CLSREFSDAA VAEATCEFLV VNQRKLLASF PNLLPQFFPL LLKLIAWNWE KLEKSFLKIF PGLISPGSFL PLFPSIVDLP ILVVALEKVE
201: RSSGSGSRVG GSIASIQKSA APEMLLALMD EAYTGSTIGD GGDDSESEDN NTIDVADPLF LELLKDENDG LAERHRASPT LNAALQAAAS GPRSERMKQT
301: LKIAPRLLDV YFSVTLRDAN DSLICALIPL LMTRNSTMFP DKIFSHEIRR RLLEFVLAAF QRSPNFIALL KKPIIDRLGE AYDDVAKREL ALQLCWAIGE
401: YGGGGESHKE AARELFESLE LLVYENLSSS RLGLRQESGN GSRRTTQSRL LCFVVTAIAK LATYHRELLP RARVALGKVV KSRISDARVW RRAHDYLGLM
501: NEPGICWSVL GPSRVSEKRF PGTVNWSEGG QKMVAHIPFH ILSEQGGPPF HDFAFSDIIP KN

Arabidopsis Description

AP-5 complex subunit zeta-1 [Source:UniProtKB/TrEMBL;Acc:Q8H1F1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.