Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0271400-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G15160.1 | Os03t0271400-01 | AT5G02150.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G473600.2 | Wheat | cytosol | 91.78 | 91.78 |
| TraesCS2A01G473900.1 | Wheat | cytosol | 91.61 | 91.61 |
| TraesCS2B01G497400.1 | Wheat | plastid | 91.08 | 91.08 |
| EES11468 | Sorghum | cytosol, peroxisome, plasma membrane, plastid | 91.08 | 90.92 |
| HORVU2Hr1G106960.1 | Barley | plastid | 91.96 | 87.38 |
| Zm00001d002235_P002 | Maize | cytosol, peroxisome, plasma membrane, plastid | 87.76 | 75.38 |
| GSMUA_Achr3P23110_001 | Banana | cytosol, extracellular | 24.48 | 74.07 |
| VIT_19s0177g00260.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 69.41 | 69.77 |
| PGSC0003DMT400037306 | Potato | cytosol, mitochondrion, plastid | 31.64 | 65.82 |
| KRH55679 | Soybean | cytosol, peroxisome, plasma membrane | 64.51 | 65.31 |
| CDX75812 | Canola | cytosol | 63.11 | 64.23 |
| Bra001585.1-P | Field mustard | cytosol | 62.59 | 63.7 |
| CDX82445 | Canola | cytosol | 62.59 | 63.7 |
| AT3G15160.1 | Thale cress | cytosol | 62.24 | 63.35 |
| Solyc10g006410.2.1 | Tomato | cytosol | 62.76 | 63.2 |
| PGSC0003DMT400037304 | Potato | cytosol | 20.63 | 58.13 |
Protein Annotations
| EnsemblPlants:Os04t0626900-01 | EnsemblPlantsGene:Os04g0626900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0016020 | GO:GO:0044599 | InterPro:AP5Z1 | InterPro:ARM-type_fold |
| PANTHER:PTHR12181 | PANTHER:PTHR12181:SF29 | PFAM:PF14764 | ProteinID:BAS91125.1 | SEG:seg | SUPFAM:SSF48371 |
| UniParc:UPI000224D27A | UniProt:A0A0P0WF83 | MapMan:22.5.5.4.1 | : | : | : |
Description
Similar to OSIGBa0117N13.4 protein. (Os04t0626900-01)
Coordinates
chr4:+:31895293..31900168
Molecular Weight (calculated)
62201.1 Da
IEP (calculated)
5.901
GRAVY (calculated)
0.075
Length
572 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPELAAGD GSYNFHLRSL SAASRDSAAA ADPASDPNLL ESVRRVCEMC KEAKGASDEM VARAFPVMSK LFQRCAAAPT QSVASSGVLL LTILQFFLDF
101: GEAVLHDADG SLRTFFRSCL SREFADPIVA ERTLEFLIAN KTKILSSFPT LIPQFFPLLL KLIASNGERL ERKFSEVLPL MMSAGSFLPL FLSLMDLPML
201: VVALEKVERS SGTLIGSSIA TIQKSAAPEM LLALMDEAYT GSAIEDAIGN AGSDDSGPLD LADPMFLDLL KDENDGIAAK HWTSPTISST LQAAVNSPQS
301: DRLKQSLKMA PRFLTLYFAT ALRDVNDSLL CALIPVVMSR YAAMFPDKVY SFEVRKRLSD FILAAFQRSP DIIALLKKPI TDRLGEAHDN PAKTELALHL
401: CWAIGEHGAG GKNRKDVARE LFENLELLLY ENLATSRLGL SQDTGFDPMG ASSRKSSQAR LLCFVVTAIA KLATFHNELL PRARVSLAKV ARSRTSDRRV
501: WQRACDYLGL LNEPAICLSV LGPSTAQGNG PGIVNWSEGG TKMVAHIPFY LLAEQKGAPI HDFSFDDLVP TE
101: GEAVLHDADG SLRTFFRSCL SREFADPIVA ERTLEFLIAN KTKILSSFPT LIPQFFPLLL KLIASNGERL ERKFSEVLPL MMSAGSFLPL FLSLMDLPML
201: VVALEKVERS SGTLIGSSIA TIQKSAAPEM LLALMDEAYT GSAIEDAIGN AGSDDSGPLD LADPMFLDLL KDENDGIAAK HWTSPTISST LQAAVNSPQS
301: DRLKQSLKMA PRFLTLYFAT ALRDVNDSLL CALIPVVMSR YAAMFPDKVY SFEVRKRLSD FILAAFQRSP DIIALLKKPI TDRLGEAHDN PAKTELALHL
401: CWAIGEHGAG GKNRKDVARE LFENLELLLY ENLATSRLGL SQDTGFDPMG ASSRKSSQAR LLCFVVTAIA KLATFHNELL PRARVSLAKV ARSRTSDRRV
501: WQRACDYLGL LNEPAICLSV LGPSTAQGNG PGIVNWSEGG TKMVAHIPFY LLAEQKGAPI HDFSFDDLVP TE
001: MSDQEGDWDF YLRILSNSAR DSTDPASDPS ILQSVKKLHG FCKMEKSDDL VARIYPQFNK VFHRSVASLS QSESGASKGL LLLAILQFFL DFGDMVLHDS
101: DPSLRTFFRS CLSREFSDAA VAEATCEFLV VNQRKLLASF PNLLPQFFPL LLKLIAWNWE KLEKSFLKIF PGLISPGSFL PLFPSIVDLP ILVVALEKVE
201: RSSGSGSRVG GSIASIQKSA APEMLLALMD EAYTGSTIGD GGDDSESEDN NTIDVADPLF LELLKDENDG LAERHRASPT LNAALQAAAS GPRSERMKQT
301: LKIAPRLLDV YFSVTLRDAN DSLICALIPL LMTRNSTMFP DKIFSHEIRR RLLEFVLAAF QRSPNFIALL KKPIIDRLGE AYDDVAKREL ALQLCWAIGE
401: YGGGGESHKE AARELFESLE LLVYENLSSS RLGLRQESGN GSRRTTQSRL LCFVVTAIAK LATYHRELLP RARVALGKVV KSRISDARVW RRAHDYLGLM
501: NEPGICWSVL GPSRVSEKRF PGTVNWSEGG QKMVAHIPFH ILSEQGGPPF HDFAFSDIIP KN
101: DPSLRTFFRS CLSREFSDAA VAEATCEFLV VNQRKLLASF PNLLPQFFPL LLKLIAWNWE KLEKSFLKIF PGLISPGSFL PLFPSIVDLP ILVVALEKVE
201: RSSGSGSRVG GSIASIQKSA APEMLLALMD EAYTGSTIGD GGDDSESEDN NTIDVADPLF LELLKDENDG LAERHRASPT LNAALQAAAS GPRSERMKQT
301: LKIAPRLLDV YFSVTLRDAN DSLICALIPL LMTRNSTMFP DKIFSHEIRR RLLEFVLAAF QRSPNFIALL KKPIIDRLGE AYDDVAKREL ALQLCWAIGE
401: YGGGGESHKE AARELFESLE LLVYENLSSS RLGLRQESGN GSRRTTQSRL LCFVVTAIAK LATYHRELLP RARVALGKVV KSRISDARVW RRAHDYLGLM
501: NEPGICWSVL GPSRVSEKRF PGTVNWSEGG QKMVAHIPFH ILSEQGGPPF HDFAFSDIIP KN
Arabidopsis Description
AP-5 complex subunit zeta-1 [Source:UniProtKB/TrEMBL;Acc:Q8H1F1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.