Factsheet for Bra036315.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra023252.1-P
Bra035511.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01720.1	Bra023252.1-P	AT1G32230.1	19548978
AT4G01720.1	Bra035511.1-P	AT1G32230.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22006	Canola	nucleus	100.0	100.0
CDY07121	Canola	nucleus	98.37	97.37
AT4G01720.1	Thale cress	nucleus	84.08	84.25
KRH19450	Soybean	nucleus	28.37	36.29
KRH02502	Soybean	nucleus	27.76	34.78
Bra019123.1-P	Field mustard	nucleus	13.67	34.54
Bra029491.1-P	Field mustard	nucleus	33.27	33.13
Bra025693.1-P	Field mustard	nucleus	19.18	32.75
Bra000793.1-P	Field mustard	nucleus	34.29	32.37
Bra013584.1-P	Field mustard	nucleus	35.51	32.34
KRH12664	Soybean	nucleus	28.57	31.04
KRH37650	Soybean	nucleus	28.98	31.0
Bra007884.1-P	Field mustard	nucleus	23.47	30.03
Bra027057.1-P	Field mustard	nucleus	33.47	29.71
Bra004285.1-P	Field mustard	nucleus	19.59	29.27
Bra034482.1-P	Field mustard	nucleus	29.59	28.6
Bra008435.1-P	Field mustard	nucleus	16.53	27.93
Bra031053.1-P	Field mustard	nucleus	26.73	27.87
Bra016535.1-P	Field mustard	nucleus	26.53	27.43
Bra010220.1-P	Field mustard	nucleus	17.14	27.27
Bra006283.1-P	Field mustard	nucleus	29.18	27.13
Bra023505.1-P	Field mustard	nucleus	28.37	26.94
Bra003588.1-P	Field mustard	nucleus	15.92	26.26
Bra011299.1-P	Field mustard	nucleus	16.94	26.18
Bra035148.1-P	Field mustard	nucleus	15.92	26.0
Bra008719.1-P	Field mustard	nucleus	28.57	25.41
Bra023983.1-P	Field mustard	nucleus	17.14	24.35
Bra040505.1-P	Field mustard	nucleus	26.53	24.3
Bra025692.1-P	Field mustard	nucleus	8.16	16.6
Bra016263.1-P	Field mustard	nucleus	23.88	15.64

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra036315	EnsemblPlants:Bra036315.1	EnsemblPlants:Bra036315.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	UniProt:M4F5F9	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF30
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002542071	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

AT4G01720 (E=3e-167) WRKY47, AtWRKY47 | WRKY47; transcription factor

Coordinates

chrA09:-:495154..498255

Molecular Weight (calculated)

53943.4 Da

IEP (calculated)

6.793

GRAVY (calculated)

-0.828

Length

490 amino acids

Sequence
(BLAST)

001: MEEHSQDGRE IAFLHSGDFL QRDSTSKDHQ PNESSVEHHH KPSIKEVDFF AVKSQPYDLG HMRTTIVGSS SFNSELAPVN SCLRTSSDDD GNDKTKAQIS
101: RLRLELERLH EENHKLKHLL DEISERYNDL QSRVLLARPT QVEGLQQHED IPQAVSSQAL EDRKPMDMNN DIPATTLKRR SPDDVDDRDH RDSPKAPRLY
201: QNKSTNHEEQ QNPHDQLPFR KARVSVRARS DATTVNDGCQ WRKYGQKMAK GNPCPRAYYR CTMAVGCPVR KQVQRCAEDT TILTTTYEGN HNHPLPPSAT
301: AMAATTSAAA AMLLSGSNTS NFHQTLSTPS AMSSSSSSLY QNFPYTSTIA TLSATAPFPT ITLDLTNPPR PLQPPPPPHF MSQYGPGAYL TNANQTRSIN
401: DNYQQLLLPN LSGPQVPRDM VDTVRAAIAT DPNFTAALAA AISNIIGGGN NNNNANTNDN NNNKVDAKSG GSSNGDSPPL PQSCTTFSTT

Best Arabidopsis Sequence Match ( AT4G01720.1 )
(BLAST)

001: MEEHIQDRRE IAFLHSGEFL HGDSDSKDHQ PNESPVERHH ESSIKEVDFF AAKSQPFDLG HVRTTTIVGS SGFNDGLGLV NSCHGTSSND GDDKTKTQIS
101: RLKLELERLH EENHKLKHLL DEVSESYNDL QRRVLLARQT QVEGLHHKQH EDVPQAGSSQ ALENRRPKDM NHETPATTLK RRSPDDVDGR DMHRGSPKTP
201: RIDQNKSTNH EEQQNPHDQL PYRKARVSVR ARSDATTVND GCQWRKYGQK MAKGNPCPRA YYRCTMAVGC PVRKQVQRCA EDTTILTTTY EGNHNHPLPP
301: SATAMAATTS AAAAMLLSGS SSSNLHQTLS SPSATSSSSF YHNFPYTSTI ATLSASAPFP TITLDLTNPP RPLQPPPQFL SQYGPAAFLP NANQIRSMNN
401: NNQQLLIPNL FGPQAPPREM VDSVRAAIAM DPNFTAALAA AISNIIGGGN NDNNNNTDIN DNKVDAKSGG SSNGDSPQLP QSCTTFSTN

Arabidopsis Description

WRKY47Probable WRKY transcription factor 47 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSI7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.