Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G113300.1 | Wheat | nucleus | 97.76 | 97.36 |
| HORVU3Hr1G020210.2 | Barley | nucleus | 96.12 | 89.54 |
| CDX86714 | Canola | nucleus | 13.67 | 78.82 |
| Os01t0185900-01 | Rice | nucleus | 66.94 | 64.69 |
| Zm00001d008794_P001 | Maize | nucleus | 56.53 | 51.3 |
| KRG89544 | Soybean | nucleus | 16.94 | 50.92 |
| EES02331 | Sorghum | nucleus | 55.71 | 49.82 |
| Zm00001d039532_P001 | Maize | nucleus | 54.9 | 49.18 |
| GSMUA_Achr7P13400_001 | Banana | nucleus | 34.49 | 42.14 |
| Bra025693.1-P | Field mustard | nucleus | 21.43 | 36.59 |
| CDY26717 | Canola | nucleus | 21.43 | 36.59 |
| KRH63398 | Soybean | nucleus | 38.98 | 35.97 |
| PGSC0003DMT400017859 | Potato | nucleus | 32.45 | 35.89 |
| Solyc02g067430.2.1 | Tomato | nucleus | 32.04 | 35.68 |
| VIT_14s0108g00120.t01 | Wine grape | nucleus | 36.53 | 35.66 |
| Solyc05g007110.2.1 | Tomato | nucleus | 28.16 | 35.2 |
| Solyc03g113120.2.1 | Tomato | nucleus | 36.33 | 33.97 |
| PGSC0003DMT400046570 | Potato | nucleus | 36.33 | 33.9 |
| VIT_01s0026g01730.t01 | Wine grape | nucleus | 40.82 | 33.67 |
| CDX69548 | Canola | nucleus | 29.39 | 33.33 |
| KRH56941 | Soybean | nucleus | 37.76 | 33.09 |
| Bra031053.1-P | Field mustard | nucleus | 31.63 | 32.98 |
| Bra016535.1-P | Field mustard | nucleus | 31.84 | 32.91 |
| CDX85563 | Canola | nucleus | 20.82 | 32.9 |
| KRH03442 | Soybean | nucleus | 40.2 | 32.83 |
| KRG93506 | Soybean | nucleus | 32.65 | 32.65 |
| CDY63770 | Canola | nucleus | 33.88 | 32.3 |
| CDX78611 | Canola | nucleus | 34.69 | 32.26 |
| Bra006283.1-P | Field mustard | nucleus | 34.69 | 32.26 |
| VIT_17s0000g05810.t01 | Wine grape | nucleus | 39.8 | 32.23 |
| AT1G18860.1 | Thale cress | nucleus | 34.69 | 32.2 |
| CDX70593 | Canola | nucleus | 34.49 | 32.13 |
| KRH54509 | Soybean | nucleus | 40.2 | 32.03 |
| Bra023505.1-P | Field mustard | nucleus | 33.47 | 31.78 |
| AT5G15130.1 | Thale cress | nucleus | 35.31 | 31.57 |
| KRH74791 | Soybean | nucleus | 32.65 | 31.43 |
| CDX96692 | Canola | nucleus | 33.06 | 31.33 |
| CDX83804 | Canola | nucleus | 32.86 | 31.26 |
| CDX69549 | Canola | nucleus | 35.1 | 31.22 |
| CDX85052 | Canola | nucleus | 34.9 | 31.09 |
| KRH01137 | Soybean | nucleus | 34.29 | 31.05 |
| Bra008719.1-P | Field mustard | nucleus | 34.9 | 31.03 |
| KRH40121 | Soybean | nucleus | 34.08 | 30.87 |
| CDY21693 | Canola | nucleus | 32.65 | 30.83 |
| CDX81900 | Canola | nucleus | 32.65 | 30.83 |
| CDY28692 | Canola | nucleus | 33.47 | 30.48 |
| Bra040505.1-P | Field mustard | nucleus | 32.86 | 30.09 |
| KRH33270 | Soybean | nucleus | 18.57 | 29.84 |
| KRH69334 | Soybean | nucleus | 32.04 | 29.79 |
| KRG99150 | Soybean | nucleus | 31.43 | 29.11 |
| Solyc06g070990.2.1 | Tomato | nucleus | 37.76 | 28.51 |
| CDY19255 | Canola | nucleus | 12.24 | 25.21 |
| TraesCS3B01G199000.2 | Wheat | nucleus | 29.8 | 25.17 |
| TraesCS6B01G357600.1 | Wheat | nucleus | 26.73 | 23.39 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 15.51 | 23.03 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 13.47 | 22.84 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 15.31 | 22.8 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 14.9 | 22.67 |
| TraesCS1B01G434300.1 | Wheat | nucleus | 28.78 | 22.52 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 14.9 | 22.39 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 15.92 | 21.97 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 14.69 | 21.75 |
| CDY72612 | Canola | nucleus | 10.61 | 21.58 |
| Bra025692.1-P | Field mustard | nucleus | 10.61 | 21.58 |
| CDX86713 | Canola | nucleus | 4.69 | 19.49 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF37 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS3B01G130000 |
| EnsemblPlants:TraesCS3B01G130000.1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3B:-:112262794..112264782
Molecular Weight (calculated)
51070.8 Da
IEP (calculated)
7.824
GRAVY (calculated)
-0.380
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVAVERPPP VKEENKPETM EIASALPMVL ESFPSTQRNS ITTSKDDKLE ATKAEMGEVR EENERLKTLL SHIVRDYQSL QTHFQDAVKV KHQAPAADKL
101: PAASAPAPTA DDLVSLSLGS GGYARPKGAH QRSLSSSSSG TETDPDDQLS LGLSSRRSTD GDNRQVARPS ATPLMNLSSD SSADDSAAPG SDLPAAACPP
201: ATKARKSPSA GVDGADDEVL QQQAKKARVS VRVKCDTPTM NDGCQWRKYG QKISKGNPCP RAYYRCTVAP SCPVRKQVQR CADDMSILIT TYEGTHSHPL
301: PPAAAAMAST TSAAASMLLA GSSSSSSHGH HLPFASAGLL GPTTISTIAS CPTVTLDLTA PHSLMQQQYQ SPYAAGYESK ALPAAWSSGY LAPYAGGLPF
401: YGKSSLPAMG QHFGLGMATT RAEQLYGAAH SSSYLQRTSS GGGVHGAPAA APAVTDTIAK AITLDPSFQS VLAAAITSYM GRGAGAAAHK
101: PAASAPAPTA DDLVSLSLGS GGYARPKGAH QRSLSSSSSG TETDPDDQLS LGLSSRRSTD GDNRQVARPS ATPLMNLSSD SSADDSAAPG SDLPAAACPP
201: ATKARKSPSA GVDGADDEVL QQQAKKARVS VRVKCDTPTM NDGCQWRKYG QKISKGNPCP RAYYRCTVAP SCPVRKQVQR CADDMSILIT TYEGTHSHPL
301: PPAAAAMAST TSAAASMLLA GSSSSSSHGH HLPFASAGLL GPTTISTIAS CPTVTLDLTA PHSLMQQQYQ SPYAAGYESK ALPAAWSSGY LAPYAGGLPF
401: YGKSSLPAMG QHFGLGMATT RAEQLYGAAH SSSYLQRTSS GGGVHGAPAA APAVTDTIAK AITLDPSFQS VLAAAITSYM GRGAGAAAHK
001: MEKDDFLRSG HGREESHDEM RKLDSSHDDS HQEHDHIIRS KLDSTKVEMD EAKEENRRLK SSLSKIKKDF DILQTQYNQL MAKHNEPTKF QSKGHHQDKG
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
Arabidopsis Description
WRKY61WRKY DNA-binding protein 61 [Source:TAIR;Acc:AT1G18860]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.