Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031053.1-P | Field mustard | nucleus | 88.63 | 97.87 |
| CDY21693 | Canola | nucleus | 96.92 | 96.92 |
| CDX86714 | Canola | nucleus | 14.84 | 90.59 |
| CDX83804 | Canola | nucleus | 80.73 | 81.36 |
| CDX96692 | Canola | nucleus | 79.77 | 80.08 |
| AT1G18860.1 | Thale cress | nucleus | 77.65 | 76.33 |
| CDY72612 | Canola | nucleus | 34.1 | 73.44 |
| CDX86713 | Canola | nucleus | 15.41 | 67.8 |
| CDY19255 | Canola | nucleus | 29.29 | 63.87 |
| CDY26717 | Canola | nucleus | 27.36 | 49.48 |
| CDX97845 | Canola | nucleus | 17.53 | 37.76 |
| Solyc03g113120.2.1 | Tomato | nucleus | 36.22 | 35.88 |
| CDY11652 | Canola | nucleus | 26.2 | 35.51 |
| PGSC0003DMT400046570 | Potato | nucleus | 35.84 | 35.43 |
| CDX69548 | Canola | nucleus | 29.48 | 35.42 |
| CDY68857 | Canola | nucleus | 25.05 | 35.14 |
| CDY63770 | Canola | nucleus | 34.68 | 35.02 |
| KRH63398 | Soybean | nucleus | 35.65 | 34.84 |
| Zm00001d045375_P001 | Maize | nucleus | 16.76 | 34.8 |
| CDY56082 | Canola | nucleus | 25.63 | 34.73 |
| CDX78611 | Canola | nucleus | 35.07 | 34.54 |
| CDX70593 | Canola | nucleus | 34.87 | 34.41 |
| CDX81493 | Canola | nucleus | 20.04 | 33.55 |
| CDX85052 | Canola | nucleus | 34.87 | 32.91 |
| CDX69549 | Canola | nucleus | 34.87 | 32.85 |
| KRH56941 | Soybean | nucleus | 35.26 | 32.74 |
| TraesCS3B01G130000.1 | Wheat | nucleus | 30.83 | 32.65 |
| VIT_17s0000g05810.t01 | Wine grape | nucleus | 37.76 | 32.4 |
| CDY28692 | Canola | nucleus | 33.53 | 32.34 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 30.64 | 32.32 |
| CDY01891 | Canola | nucleus | 20.23 | 32.01 |
| KRH03442 | Soybean | nucleus | 36.8 | 31.83 |
| Os01t0185900-01 | Rice | nucleus | 31.02 | 31.76 |
| KRH54509 | Soybean | nucleus | 37.57 | 31.71 |
| CDX85563 | Canola | nucleus | 18.88 | 31.61 |
| CDX96044 | Canola | nucleus | 19.85 | 31.4 |
| HORVU3Hr1G020210.2 | Barley | nucleus | 31.02 | 30.61 |
| CDY21301 | Canola | nucleus | 29.48 | 30.18 |
| CDX90863 | Canola | nucleus | 29.29 | 29.98 |
| Os06t0146250-00 | Rice | nucleus | 34.68 | 29.8 |
| CDY16669 | Canola | nucleus | 27.94 | 29.47 |
| Solyc06g070990.2.1 | Tomato | nucleus | 36.8 | 29.43 |
| CDX94553 | Canola | nucleus | 27.75 | 29.33 |
| CDY22006 | Canola | nucleus | 27.36 | 28.98 |
| Zm00001d008794_P001 | Maize | nucleus | 30.06 | 28.89 |
| OQU75809 | Sorghum | nucleus | 34.68 | 28.8 |
| CDY07121 | Canola | nucleus | 27.36 | 28.69 |
| TraesCS7D01G092500.2 | Wheat | nucleus | 32.18 | 28.26 |
| CDX72327 | Canola | nucleus | 15.41 | 28.07 |
| Zm00001d039532_P001 | Maize | nucleus | 29.48 | 27.97 |
| EES02331 | Sorghum | nucleus | 29.48 | 27.92 |
| CDX82900 | Canola | nucleus | 27.75 | 27.64 |
| CDY22299 | Canola | nucleus | 15.41 | 27.59 |
| CDY67287 | Canola | nucleus | 15.41 | 27.59 |
| CDX75196 | Canola | nucleus | 15.03 | 27.56 |
| TraesCS7D01G092600.1 | Wheat | nucleus | 31.98 | 27.44 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 31.98 | 27.26 |
| CDX79347 | Canola | nucleus | 15.22 | 26.51 |
| CDX88573 | Canola | nucleus | 15.22 | 26.25 |
| CDY39879 | Canola | nucleus | 15.41 | 26.06 |
| CDX87347 | Canola | nucleus | 15.03 | 26.0 |
| CDX67971 | Canola | nucleus | 14.84 | 25.93 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 30.06 | 25.79 |
| TraesCS7D01G092400.1 | Wheat | nucleus | 29.87 | 25.62 |
| CDX68787 | Canola | nucleus | 15.41 | 25.08 |
| CDY19535 | Canola | nucleus | 26.59 | 25.0 |
| CDY12937 | Canola | nucleus | 26.59 | 25.0 |
| CDY24892 | Canola | nucleus | 24.86 | 24.62 |
| CDY08634 | Canola | nucleus | 22.74 | 23.46 |
| CDY70096 | Canola | nucleus | 15.03 | 22.61 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078CYJ1 | EnsemblPlants:CDX81900 | ProteinID:CDX81900 | ProteinID:CDX81900.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00136858001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF3826 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC08g37010D
Coordinates
chrLK031826:+:1396015..1398408
Molecular Weight (calculated)
57442.1 Da
IEP (calculated)
6.424
GRAVY (calculated)
-0.939
Length
519 amino acids
Sequence
(BLAST)
(BLAST)
001: MENEDFLRST VHGREERHEE KRKHVSSHDD SHQEQDHIIR SKLDSIRVEM EEAKEENRRL KSSLSRTRKD FEILQTQYNQ LMVQHEDWTN KFSPKGHHQD
101: KEDEDKVNIS EREELVLLSL GRRSKSPVPS GSMTNQDEKG KGLMDETGDG KKTDEHDEGL SMGFEYKDLS NPSEKLEIDH SQEKTSLEVN SSNKIPSENS
201: FGFKNDGDDH EDEEELLPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAPSC PVRKQVQRCS EDMSILISTY EGTHNHPLPA
301: SATPMASATS AAASMLISGA SSSGAADLHG LNFSLSGNSI TPKPKSPFLQ TSSSPSSTGH PTVTLDLTAS SSSQQTFLSM LNRFSASPSN VPRSNSYPST
401: NLNFSNNTNT LMNWGSDSGS GTRNEQYRAA FGNVGTHQQS PYRYMIQTRT TGSSFDPFGR SSSSSTNPTH QVQSLPAETI KAITTDPSFQ SALATALSSI
501: IGGDLKMDNV TKDEAGKSP
101: KEDEDKVNIS EREELVLLSL GRRSKSPVPS GSMTNQDEKG KGLMDETGDG KKTDEHDEGL SMGFEYKDLS NPSEKLEIDH SQEKTSLEVN SSNKIPSENS
201: FGFKNDGDDH EDEEELLPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAPSC PVRKQVQRCS EDMSILISTY EGTHNHPLPA
301: SATPMASATS AAASMLISGA SSSGAADLHG LNFSLSGNSI TPKPKSPFLQ TSSSPSSTGH PTVTLDLTAS SSSQQTFLSM LNRFSASPSN VPRSNSYPST
401: NLNFSNNTNT LMNWGSDSGS GTRNEQYRAA FGNVGTHQQS PYRYMIQTRT TGSSFDPFGR SSSSSTNPTH QVQSLPAETI KAITTDPSFQ SALATALSSI
501: IGGDLKMDNV TKDEAGKSP
001: MEKDDFLRSG HGREESHDEM RKLDSSHDDS HQEHDHIIRS KLDSTKVEMD EAKEENRRLK SSLSKIKKDF DILQTQYNQL MAKHNEPTKF QSKGHHQDKG
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
Arabidopsis Description
WRKY61WRKY DNA-binding protein 61 [Source:TAIR;Acc:AT1G18860]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.