Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034482.1-P | Field mustard | nucleus | 86.45 | 89.35 |
| CDY08634 | Canola | nucleus | 80.73 | 84.1 |
| CDY12937 | Canola | nucleus | 76.14 | 72.28 |
| AT1G62300.1 | Thale cress | nucleus | 76.14 | 72.15 |
| CDY19535 | Canola | nucleus | 75.76 | 71.92 |
| CDX86714 | Canola | nucleus | 11.64 | 71.76 |
| CDX97845 | Canola | nucleus | 27.86 | 60.58 |
| CDX82900 | Canola | nucleus | 48.09 | 48.37 |
| GSMUA_Achr3P31130_001 | Banana | mitochondrion, nucleus | 31.87 | 47.71 |
| PGSC0003DMT400056725 | Potato | nucleus | 44.85 | 47.38 |
| Solyc02g032950.2.1 | Tomato | nucleus | 44.85 | 47.19 |
| GSMUA_Achr3P03090_001 | Banana | nucleus | 34.35 | 47.12 |
| VIT_10s0116g01200.t01 | Wine grape | nucleus | 46.56 | 45.61 |
| KRH36485 | Soybean | nucleus | 46.76 | 45.29 |
| GSMUA_Achr5P16750_001 | Banana | nucleus | 41.79 | 45.06 |
| CDY21301 | Canola | nucleus | 43.51 | 44.97 |
| CDX90863 | Canola | nucleus | 43.32 | 44.77 |
| KRH11472 | Soybean | nucleus | 47.33 | 44.52 |
| Solyc02g080890.2.1 | Tomato | nucleus | 46.18 | 44.0 |
| KRH02033 | Soybean | nucleus | 41.03 | 43.97 |
| PGSC0003DMT400042400 | Potato | nucleus | 46.37 | 43.94 |
| GSMUA_Achr6P05880_001 | Banana | nucleus | 39.89 | 43.91 |
| KRH51128 | Soybean | nucleus, plastid | 43.32 | 43.91 |
| GSMUA_Achr10P... | Banana | nucleus | 41.41 | 43.75 |
| GSMUA_Achr2P15200_001 | Banana | nucleus | 44.27 | 43.61 |
| CDX94553 | Canola | nucleus | 40.08 | 42.77 |
| GSMUA_Achr6P13630_001 | Banana | nucleus | 42.75 | 42.75 |
| CDY16669 | Canola | nucleus | 39.89 | 42.48 |
| GSMUA_Achr10P... | Banana | nucleus | 41.22 | 42.35 |
| GSMUA_Achr6P07620_001 | Banana | nucleus, plastid | 36.64 | 39.34 |
| Zm00001d039245_P001 | Maize | nucleus | 37.02 | 35.86 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 37.79 | 34.43 |
| TraesCS3B01G199000.2 | Wheat | nucleus | 37.98 | 34.31 |
| EES02155 | Sorghum | nucleus | 37.21 | 34.21 |
| CDX81493 | Canola | nucleus | 19.66 | 33.23 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 37.79 | 31.48 |
| TraesCS3D01G173300.2 | Wheat | plastid | 37.79 | 31.13 |
| CDX75196 | Canola | nucleus | 16.79 | 31.1 |
| CDY22006 | Canola | nucleus | 28.82 | 30.82 |
| CDX96044 | Canola | nucleus | 19.27 | 30.79 |
| CDY07121 | Canola | nucleus | 28.82 | 30.51 |
| CDY68857 | Canola | nucleus | 21.37 | 30.27 |
| CDY01891 | Canola | nucleus | 18.89 | 30.18 |
| CDY56082 | Canola | nucleus | 21.37 | 29.24 |
| CDY11652 | Canola | nucleus | 21.18 | 28.98 |
| CDY39879 | Canola | nucleus | 16.79 | 28.66 |
| CDY22299 | Canola | nucleus | 15.84 | 28.62 |
| CDY67287 | Canola | nucleus | 15.84 | 28.62 |
| CDX72327 | Canola | nucleus | 15.46 | 28.42 |
| CDX88573 | Canola | nucleus | 16.03 | 27.91 |
| CDX79347 | Canola | nucleus | 15.84 | 27.85 |
| CDX68787 | Canola | nucleus | 16.79 | 27.59 |
| CDX87347 | Canola | nucleus | 15.65 | 27.33 |
| CDX67971 | Canola | nucleus | 15.46 | 27.27 |
| CDY26717 | Canola | nucleus | 14.89 | 27.18 |
| CDX96692 | Canola | nucleus | 24.62 | 24.95 |
| CDX81900 | Canola | nucleus | 24.62 | 24.86 |
| CDX83804 | Canola | nucleus | 24.43 | 24.85 |
| CDY21693 | Canola | nucleus | 24.24 | 24.47 |
| CDY63770 | Canola | nucleus | 23.47 | 23.93 |
| CDY70096 | Canola | nucleus | 15.65 | 23.77 |
| CDX70593 | Canola | nucleus | 23.86 | 23.76 |
| CDX69548 | Canola | nucleus | 19.47 | 23.61 |
| CDY28692 | Canola | nucleus | 24.24 | 23.61 |
| CDX78611 | Canola | nucleus | 23.66 | 23.53 |
| CDX85563 | Canola | nucleus | 13.74 | 23.23 |
| CDX69549 | Canola | nucleus | 23.09 | 21.96 |
| CDX85052 | Canola | nucleus | 22.9 | 21.82 |
| Os01t0246700-01 | Rice | nucleus | 15.65 | 19.85 |
| CDY19255 | Canola | nucleus | 7.44 | 16.39 |
| CDY72612 | Canola | nucleus | 7.25 | 15.77 |
| CDX86713 | Canola | nucleus | 2.48 | 11.02 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078GI66 | UniProt:A0A078GI66 | EnsemblPlants:CDY24892 | ProteinID:CDY24892 |
| ProteinID:CDY24892.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00028662001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF31 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE36C0 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaA03g59960DBnaA03g59960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GI66]
Coordinates
chrLK032165:-:471645..482200
Molecular Weight (calculated)
58006.2 Da
IEP (calculated)
7.062
GRAVY (calculated)
-0.690
Length
524 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIGWSGLTL DSSSLDLVIP KRFKKNYTHR RLSTPLTMST TGDDVDDNKT KISNAARDFR FPVSLSGICD RQDNDISSGV AGENDCAVPG EDFFSDEKSR
101: VCYLEDAGFC VKKEVQDDRT DVHTGLNLRT RSDQSVTDDE ESYEMEDKCA KNESIKLQDE LKKVTIENQK LRELLTQASN SYTSLQMHIV SLMQQQQKQQ
201: NKAIEATENH EETIVPRQFL DLVPSRAPGE AEDVSNSSTE DRTRSGGSSA AERRNNEVRD GKRLGREESP ETESNKVQKV NNSTFDQPGE AIMRKARVSV
301: RARSEAPMIS DGCQWRKYGQ KMAKGNPCPR AYYRCTMITG CPVRKQVQRC AEDRSILITT YEGNHNHPLP PAAVAMASTT TAAANMLLSG SMSSHDVMMN
401: PTNLLARAVL PCSTSMATIS ASAPFPTRPQ QQQMTNIPPT AFSQPHAVAN TITALTTDPN FTAALAAVIT SMINGSKHHE GEGNDRTVSM RPAYHSSKKV
501: LVNDKLEAEV KKNRKMISLK ETLL
101: VCYLEDAGFC VKKEVQDDRT DVHTGLNLRT RSDQSVTDDE ESYEMEDKCA KNESIKLQDE LKKVTIENQK LRELLTQASN SYTSLQMHIV SLMQQQQKQQ
201: NKAIEATENH EETIVPRQFL DLVPSRAPGE AEDVSNSSTE DRTRSGGSSA AERRNNEVRD GKRLGREESP ETESNKVQKV NNSTFDQPGE AIMRKARVSV
301: RARSEAPMIS DGCQWRKYGQ KMAKGNPCPR AYYRCTMITG CPVRKQVQRC AEDRSILITT YEGNHNHPLP PAAVAMASTT TAAANMLLSG SMSSHDVMMN
401: PTNLLARAVL PCSTSMATIS ASAPFPTRPQ QQQMTNIPPT AFSQPHAVAN TITALTTDPN FTAALAAVIT SMINGSKHHE GEGNDRTVSM RPAYHSSKKV
501: LVNDKLEAEV KKNRKMISLK ETLL
001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
Arabidopsis Description
WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.