Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 65.98 | 68.82 |
| GSMUA_Achr6P05880_001 | Banana | nucleus | 60.71 | 67.86 |
| GSMUA_Achr3P31130_001 | Banana | mitochondrion, nucleus | 39.1 | 59.43 |
| GSMUA_Achr5P16750_001 | Banana | nucleus | 53.76 | 58.85 |
| GSMUA_Achr10P... | Banana | nucleus | 54.32 | 58.27 |
| GSMUA_Achr3P03090_001 | Banana | nucleus | 41.54 | 57.85 |
| GSMUA_Achr6P13630_001 | Banana | nucleus | 56.58 | 57.44 |
| CDX97845 | Canola | nucleus | 24.81 | 54.77 |
| VIT_10s0116g01200.t01 | Wine grape | nucleus | 54.14 | 53.83 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 9.59 | 52.58 |
| KRH36485 | Soybean | nucleus | 51.13 | 50.28 |
| GSMUA_Achr6P07620_001 | Banana | nucleus, plastid | 46.05 | 50.2 |
| Solyc02g032950.2.1 | Tomato | nucleus | 46.62 | 49.8 |
| PGSC0003DMT400056725 | Potato | nucleus | 46.43 | 49.8 |
| KRH11472 | Soybean | nucleus | 52.07 | 49.73 |
| Solyc02g080890.2.1 | Tomato | nucleus | 50.38 | 48.73 |
| KRH02033 | Soybean | nucleus | 44.74 | 48.67 |
| PGSC0003DMT400042400 | Potato | nucleus | 50.56 | 48.64 |
| VIT_12s0059g00880.t01 | Wine grape | nucleus | 54.14 | 48.57 |
| KRH51128 | Soybean | nucleus, plastid | 46.8 | 48.16 |
| CDY19535 | Canola | nucleus | 48.5 | 46.74 |
| CDX82900 | Canola | nucleus | 45.68 | 46.64 |
| AT4G04450.1 | Thale cress | nucleus | 46.24 | 46.59 |
| CDY12937 | Canola | nucleus | 48.31 | 46.56 |
| CDX90863 | Canola | nucleus | 44.36 | 46.55 |
| Bra027057.1-P | Field mustard | nucleus | 48.12 | 46.38 |
| CDY21301 | Canola | nucleus | 44.17 | 46.35 |
| PGSC0003DMT400038852 | Potato | nucleus | 48.5 | 46.32 |
| AT1G62300.1 | Thale cress | nucleus | 47.93 | 46.11 |
| AT4G22070.1 | Thale cress | nucleus | 46.62 | 46.1 |
| Bra000793.1-P | Field mustard | nucleus | 44.92 | 46.05 |
| Bra013584.1-P | Field mustard | nucleus | 46.24 | 45.72 |
| Bra034482.1-P | Field mustard | nucleus | 42.86 | 44.97 |
| CDX94553 | Canola | nucleus | 41.35 | 44.81 |
| CDY08634 | Canola | nucleus | 42.29 | 44.73 |
| CDY16669 | Canola | nucleus | 40.98 | 44.31 |
| CDY24892 | Canola | nucleus | 43.61 | 44.27 |
| Bra029491.1-P | Field mustard | nucleus | 40.04 | 43.29 |
| KRH22585 | Soybean | nucleus | 49.06 | 42.51 |
| GSMUA_Achr2P18390_001 | Banana | nucleus | 29.32 | 42.51 |
| Solyc07g051840.2.1 | Tomato | nucleus | 49.81 | 42.0 |
| KRH25355 | Soybean | nucleus | 48.31 | 41.86 |
| GSMUA_Achr11P... | Banana | nucleus | 32.14 | 40.81 |
| KRH56160 | Soybean | nucleus | 47.74 | 40.45 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 43.23 | 40.0 |
| Zm00001d039245_P001 | Maize | nucleus | 40.23 | 39.56 |
| TraesCS3B01G199000.2 | Wheat | nucleus | 42.67 | 39.14 |
| EES02155 | Sorghum | nucleus | 41.73 | 38.95 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 13.91 | 38.54 |
| GSMUA_Achr7P08850_001 | Banana | nucleus | 26.88 | 36.86 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 42.86 | 36.25 |
| TraesCS3D01G173300.2 | Wheat | plastid | 43.23 | 36.16 |
| GSMUA_Achr10P... | Banana | nucleus | 14.85 | 34.05 |
| GSMUA_Achr10P... | Banana | nucleus | 23.5 | 33.16 |
| GSMUA_Achr7P13400_001 | Banana | nucleus | 24.81 | 32.92 |
| GSMUA_Achr1P05240_001 | Banana | nucleus | 19.92 | 32.52 |
| GSMUA_Achr11P... | Banana | nucleus | 14.66 | 31.84 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 11.28 | 31.58 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 13.91 | 31.49 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 16.35 | 31.07 |
| GSMUA_Achr3P20290_001 | Banana | nucleus | 21.62 | 30.03 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 16.17 | 29.76 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 12.22 | 29.15 |
| GSMUA_Achr10P... | Banana | nucleus | 15.6 | 28.82 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 14.85 | 28.73 |
| GSMUA_Achr7P18820_001 | Banana | nucleus | 24.06 | 28.51 |
| GSMUA_Achr6P02330_001 | Banana | nucleus | 19.17 | 27.64 |
| GSMUA_Achr10P... | Banana | nucleus | 23.87 | 26.51 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 15.79 | 25.07 |
| Os01t0246700-01 | Rice | nucleus | 18.61 | 23.97 |
| GSMUA_Achr5P09730_001 | Banana | nucleus | 20.86 | 15.59 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr2G15200_001 | EnsemblPlants:GSMUA_Achr2P15200_001 | EnsemblPlants:GSMUA_Achr2T15200_001 | InterPro:IPR003657 |
| InterPro:IPR036576 | UniProt:M0S861 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF31 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000294CB76 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
Probable WRKY transcription factor 42 [Source:GMGC_GENE;Acc:GSMUA_Achr2G15200_001]
Coordinates
chr2:-:16588921..16591256
Molecular Weight (calculated)
57699.3 Da
IEP (calculated)
6.681
GRAVY (calculated)
-0.745
Length
532 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEGGTTRGR GLTLNTSPPL FLSPPLDHGG DPRRPQPMES DRYRHRSGEN RPVVNEMDFF SDERWKAVSK VEPDLDLKVT REDLTINTGL NLLTANAGSD
101: QSTVDDGMSP ADDSKENKSE LAAMQAELAR TKEENQKLNE TLNQLTASYN ALQMHLIALM QQQHQPKRDP QAHEAADEKG QATNHEHGGV LVPRQFMDLG
201: PAAEADEPSH SSTASRDQPS SPPDNVEVGS KDRQLHKQIA RPDRAKSSRE DSPDQGWNPS KDPKLSPSKS TEQVQEAIMR KARVSVRARS EAPMITDGCQ
301: WRKYGQKMAK GNPCPRAYYR CTMATACPVR KQVQRCAEDR SILITTYEGT HNHPLPPAAM AMASTTSAAV SMLLSGSMSS PEGLMNPNFL ARTILPYSSS
401: MATISASAPF PTVTLDLTHN TNALQLQRPP AQFPLSFPGM PVGMEAAHLL HPKAQSALPS TLADTVSAAT AAITADPNFT AALAAAISSI ISGNHQSASN
501: YDDNKSSANK TSSDGNNNKD DNPSRSNFRA TQ
101: QSTVDDGMSP ADDSKENKSE LAAMQAELAR TKEENQKLNE TLNQLTASYN ALQMHLIALM QQQHQPKRDP QAHEAADEKG QATNHEHGGV LVPRQFMDLG
201: PAAEADEPSH SSTASRDQPS SPPDNVEVGS KDRQLHKQIA RPDRAKSSRE DSPDQGWNPS KDPKLSPSKS TEQVQEAIMR KARVSVRARS EAPMITDGCQ
301: WRKYGQKMAK GNPCPRAYYR CTMATACPVR KQVQRCAEDR SILITTYEGT HNHPLPPAAM AMASTTSAAV SMLLSGSMSS PEGLMNPNFL ARTILPYSSS
401: MATISASAPF PTVTLDLTHN TNALQLQRPP AQFPLSFPGM PVGMEAAHLL HPKAQSALPS TLADTVSAAT AAITADPNFT AALAAAISSI ISGNHQSASN
501: YDDNKSSANK TSSDGNNNKD DNPSRSNFRA TQ
001: MFRFPVSLGG GPRENLKPSD EQHQRAVVNE VDFFRSAEKR DRVSREEQNI IADETHRVHV KRENSRVDDH DDRSTDHINI GLNLLTANTG SDESMVDDGL
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ
Arabidopsis Description
WRKY42WRKY transcription factor 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEC3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.