Factsheet for GSMUA_Achr7P05200_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 21110110

gfp PMID: 21110110 doi

UK Shekhawat, TR Ganapathi, L Srinivas

Plant Cell Culture Technology Section, Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Trombay, Mumbai, 400 085, India.

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P10080_001
GSMUA_Achr1P16990_001
GSMUA_Achr2P05100_001
GSMUA_Achr2P08200_001
GSMUA_Achr3P13440_001
GSMUA_Achr3P22420_001
GSMUA_Achr3P28040_001
GSMUA_Achr4P01930_001
GSMUA_Achr4P05970_001
GSMUA_Achr4P05990_001
GSMUA_Achr4P06000_001
GSMUA_Achr4P12750_001
GSMUA_Achr5P16460_001
GSMUA_Achr6P22990_001
GSMUA_Achr7P05200_001
GSMUA_Achr7P16090_001
GSMUA_Achr7P19340_001
GSMUA_Achr8P08040_001
GSMUA_Achr9P22750_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80840.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr11P...	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr1P10080_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr2P05100_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr3P13440_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr4P01930_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr5P16460_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr7P05200_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr7P16090_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr7P19340_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr11P...	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr1P10080_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr2P05100_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr3P13440_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr4P01930_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr5P16460_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr7P05200_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr7P16090_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr7P19340_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr11P...	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr1P10080_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr2P05100_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr3P13440_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr4P01930_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr5P16460_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr7P05200_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr7P16090_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr7P19340_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr11P...	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr1P10080_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr2P05100_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr3P13440_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr4P01930_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr5P16460_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr7P05200_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr7P16090_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr7P19340_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr11P...	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr1P10080_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr2P05100_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr3P13440_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr4P01930_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr5P16460_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr7P05200_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr7P16090_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr7P19340_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr11P...	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr1P10080_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr2P05100_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr3P13440_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr4P01930_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr5P16460_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr7P05200_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr7P16090_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr7P19340_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr11P...	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr1P10080_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr2P05100_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr3P13440_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr4P01930_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr5P16460_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr7P05200_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr7P16090_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr7P19340_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr10P...	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr11P...	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr1P10080_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr2P05100_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr3P13440_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr4P01930_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr5P16460_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr7P05200_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr7P16090_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr7P19340_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr6P22990_001	AT3G27420.1	21798944
AT2G25000.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr11P...	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr1P10080_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr2P05100_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr3P13440_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr4P01930_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr5P16460_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr7P05200_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr7P16090_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr7P19340_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr11P...	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr1P10080_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr2P05100_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr3P13440_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr4P01930_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr5P16460_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr7P05200_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr7P16090_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr7P19340_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr11P...	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr1P16990_001	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr2P08200_001	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr3P22420_001	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr8P08040_001	AT5G52650.1	21798944
AT2G25000.1	GSMUA_AchrUn_...	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr3P28040_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr4P05970_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr4P05990_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr4P06000_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr4P12750_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr9P22750_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_AchrUn_...	AT5G57870.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT1G71230.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr11P...	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr1P10080_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr2P05100_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr3P13440_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr4P01930_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr5P16460_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr7P05200_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr7P16090_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr7P19340_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr11P...	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr1P10080_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr2P05100_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr3P13440_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr4P01930_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr5P16460_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr7P05200_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr7P16090_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr7P19340_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr11P...	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr1P10080_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr2P05100_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr3P13440_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr4P01930_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr5P16460_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr7P05200_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr7P16090_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr7P19340_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr11P...	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr1P10080_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr2P05100_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr3P13440_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr4P01930_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr5P16460_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr7P05200_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr7P16090_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr7P19340_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr11P...	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr1P10080_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr2P05100_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr3P13440_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr4P01930_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr5P16460_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr7P05200_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr7P16090_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr7P19340_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr11P...	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr1P10080_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr2P05100_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr3P13440_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr4P01930_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr5P16460_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr7P05200_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr7P16090_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr7P19340_001	AT4G31800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P13440_001	Banana	nucleus	58.21	59.27
GSMUA_Achr2P05100_001	Banana	nucleus	36.43	53.68
GSMUA_Achr11P...	Banana	nucleus	46.79	53.47
GSMUA_Achr7P19340_001	Banana	nucleus	35.71	52.08
GSMUA_Achr10P...	Banana	nucleus	52.14	50.69
GSMUA_Achr5P16460_001	Banana	nucleus	40.0	47.66
Bra019123.1-P	Field mustard	nucleus	32.14	46.39
GSMUA_Achr10P...	Banana	nucleus	37.14	44.83
Solyc08g067340.2.1	Tomato	nucleus	39.29	43.48
PGSC0003DMT400019061	Potato	nucleus	38.93	43.08
GSMUA_Achr1P10080_001	Banana	nucleus	51.07	42.69
Zm00001d053746_P001	Maize	nucleus	48.93	42.68
Solyc12g042590.1.1	Tomato	nucleus	32.86	42.59
HORVU5Hr1G065380.2	Barley	nucleus	26.43	42.53
CDX72327	Canola	nucleus	43.21	42.46
PGSC0003DMT400073710	Potato	nucleus	32.86	42.4
PGSC0003DMT400019058	Potato	nucleus	39.29	42.15
Os06t0649000-01	Rice	nucleus	50.36	41.84
VIT_09s0018g00240.t01	Wine grape	nucleus	46.43	41.8
KRH61669	Soybean	nucleus	32.5	41.36
TraesCS7D01G497400.1	Wheat	nucleus	48.21	41.28
TraesCS7A01G508800.1	Wheat	nucleus	47.86	40.98
TraesCS7B01G418500.2	Wheat	nucleus	47.86	40.73
Os02t0181300-01	Rice	nucleus	50.36	40.52
KRH47344	Soybean	nucleus	45.0	40.51
TraesCS7D01G497800.1	Wheat	nucleus	47.14	40.49
KRH23643	Soybean	nucleus	44.64	40.45
Solyc08g067360.2.1	Tomato	nucleus	37.14	40.31
AT2G25000.1	Thale cress	nucleus	38.93	40.22
KRH15674	Soybean	nucleus	40.36	40.07
EES04642	Sorghum	nucleus	51.79	39.84
TraesCS7A01G508700.1	Wheat	nucleus	46.07	39.81
TraesCS7B01G419400.1	Wheat	nucleus	45.71	39.75
Bra008435.1-P	Field mustard	nucleus	41.07	39.66
CDY22299	Canola	nucleus	41.07	39.66
CDY67287	Canola	nucleus	41.07	39.66
CDX75196	Canola	nucleus	40.0	39.58
TraesCS7B01G418400.1	Wheat	nucleus	46.07	39.57
Zm00001d015515_P001	Maize	nucleus	48.93	39.48
GSMUA_Achr7P16090_001	Banana	endoplasmic reticulum, nucleus, plastid	31.43	39.46
GSMUA_Achr4P01930_001	Banana	extracellular, golgi	40.71	39.45
TraesCS7D01G497700.1	Wheat	nucleus	46.07	39.33
KRH44560	Soybean	nucleus	43.93	39.3
HORVU7Hr1G113830.1	Barley	nucleus	44.64	39.19
Bra035148.1-P	Field mustard	nucleus	41.43	38.67
CDX87347	Canola	nucleus	41.43	38.67
Zm00001d036726_P001	Maize	nucleus	47.5	38.66
CDX88573	Canola	nucleus	41.43	38.54
AT1G80840.1	Thale cress	nucleus	41.43	38.41
Bra003588.1-P	Field mustard	nucleus	40.71	38.38
CDX67971	Canola	nucleus	40.71	38.38
EER90124	Sorghum	nucleus	46.79	38.3
CDX79347	Canola	nucleus	40.71	38.26
TraesCS6D01G136200.1	Wheat	nucleus	47.5	38.22
Zm00001d046805_P001	Maize	nucleus	47.86	38.18
CDY39879	Canola	nucleus	41.79	38.11
AT4G31800.1	Thale cress	nucleus	42.14	38.06
TraesCS6A01G146900.1	Wheat	nucleus	47.5	38.0
Bra010220.1-P	Field mustard	nucleus	41.79	37.99
KRH09652	Soybean	nucleus	44.64	37.88
Bra011299.1-P	Field mustard	nucleus	42.86	37.85
TraesCS7B01G418600.1	Wheat	nucleus	38.93	37.72
CDX68787	Canola	nucleus	42.86	37.62
VIT_04s0008g05760.t01	Wine grape	nucleus	42.5	37.54
HORVU6Hr1G028790.1	Barley	nucleus	47.14	37.39
EER88729	Sorghum	nucleus	46.43	37.36
TraesCS6B01G175100.2	Wheat	nucleus	47.14	37.18
KRH05350	Soybean	nucleus	41.07	36.86
TraesCS7A01G509000.1	Wheat	nucleus	45.71	36.78
Solyc03g116890.2.1	Tomato	nucleus	43.93	35.14
TraesCS7D01G497300.1	Wheat	plastid	46.43	34.95
Bra023983.1-P	Field mustard	nucleus	42.86	34.78
CDY70096	Canola	nucleus	42.86	34.78
PGSC0003DMT400051047	Potato	nucleus	43.93	34.65
PGSC0003DMT400073396	Potato	nucleus	43.93	34.17
TraesCS5D01G232700.1	Wheat	nucleus	32.86	33.95
Solyc06g068460.2.1	Tomato	nucleus	43.21	33.61
KRH52329	Soybean	nucleus	36.79	33.33
TraesCS5A01G225500.1	Wheat	nucleus	32.14	33.21
HORVU7Hr1G113850.4	Barley	nucleus, plastid	47.86	33.0
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	11.07	31.96
Zm00001d020495_P001	Maize	nucleus	30.36	31.95
KXG35639	Sorghum	nucleus	31.43	29.83
Os09t0417800-01	Rice	nucleus	32.86	28.93
GSMUA_Achr3P31130_001	Banana	mitochondrion, nucleus	27.5	22.0
GSMUA_Achr3P03090_001	Banana	nucleus	27.86	20.42
GSMUA_Achr11P...	Banana	nucleus	28.21	18.85
GSMUA_Achr7P08850_001	Banana	nucleus	26.07	18.81
GSMUA_Achr10P...	Banana	nucleus	25.0	18.57
GSMUA_Achr7P18820_001	Banana	nucleus	28.57	17.82
GSMUA_Achr1P05240_001	Banana	nucleus	20.71	17.79
GSMUA_Achr3P20290_001	Banana	nucleus	23.93	17.49
GSMUA_Achr2P18390_001	Banana	nucleus	22.5	17.17
GSMUA_Achr10P...	Banana	nucleus	30.36	17.14
GSMUA_Achr5P16750_001	Banana	nucleus	29.64	17.08
GSMUA_Achr7P13400_001	Banana	nucleus	24.29	16.96
GSMUA_Achr6P05880_001	Banana	nucleus	28.57	16.81
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	29.29	16.8
GSMUA_Achr6P02330_001	Banana	nucleus	22.14	16.8
GSMUA_Achr2P15200_001	Banana	nucleus	31.07	16.35
GSMUA_Achr10P...	Banana	nucleus	27.5	16.08
GSMUA_Achr10P...	Banana	nucleus	28.93	15.88
GSMUA_Achr6P13630_001	Banana	nucleus	29.29	15.65
GSMUA_Achr5P09730_001	Banana	nucleus	20.36	8.01

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr7G05200_001	EnsemblPlants:GSMUA_Achr7P05200_001	EnsemblPlants:GSMUA_Achr7T05200_001	InterPro:IPR003657
InterPro:IPR036576	UniProt:M0TEW0	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF3
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002951E47	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

Putative Probable WRKY transcription factor 60 [Source:GMGC_GENE;Acc:GSMUA_Achr7G05200_001]

Coordinates

chr7:-:3897004..3898522

Molecular Weight (calculated)

30698.3 Da

IEP (calculated)

9.175

GRAVY (calculated)

-0.632

Length

280 amino acids

Sequence
(BLAST)

001: MGSSWLDCPS LNLDLNVGLL PFPVDSPKAV SAVESKHVDK KVSIKNEKAI KALEAELVLA TEENKKLSEV LAATIASYSA VRKQLIEQMN TPPPEGGSRS
101: NSPPGKRKSE SLDANMESTS SEGSSKRVRD DCKPKVWKLH VRSDPSDTSL VVRDGYQWRK YGQKVTRDNP CPRAYFRCSF APSCPVKKKV QRSAEDTSIL
201: VATYEGEHNH DLRSRPGAPS LRPNTAAPDL KSSGSQPEME SQEFQRSLVE HMAFSLSEDP AFKAALATAI SGKMLPLRTS

Best Arabidopsis Sequence Match ( AT2G25000.1 )
(BLAST)

001: MDYDPNTNPF DLHFSGKLPK REVSASASKV VEKKWLVKDE KRNMLQDEIN RVNSENKKLT EMLARVCEKY YALNNLMEEL QSRKSPESVN FQNKQLTGKR
101: KQELDEFVSS PIGLSLGPIE NITNDKATVS TAYFAAEKSD TSLTVKDGYQ WRKYGQKITR DNPSPRAYFR CSFSPSCLVK KKVQRSAEDP SFLVATYEGT
201: HNHTGPHASV SRTVKLDLVQ GGLEPVEEKK ERGTIQEVLV QQMASSLTKD PKFTAALATA ISGRLIEHSR T

Arabidopsis Description

WRKY60Probable WRKY transcription factor 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.