Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90124 | Sorghum | nucleus | 67.73 | 68.13 |
| Zm00001d046805_P001 | Maize | nucleus | 69.19 | 67.81 |
| Os06t0649000-01 | Rice | nucleus | 66.28 | 67.66 |
| EER88729 | Sorghum | nucleus | 68.02 | 67.24 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 61.05 | 63.83 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 60.17 | 63.5 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 59.88 | 63.0 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 59.3 | 62.39 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 58.72 | 61.96 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 56.69 | 61.13 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 56.69 | 60.56 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 56.69 | 60.19 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 56.69 | 59.45 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 47.67 | 56.75 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 56.4 | 55.75 |
| Zm00001d053746_P001 | Maize | nucleus | 51.74 | 55.45 |
| Zm00001d015515_P001 | Maize | nucleus | 55.52 | 55.04 |
| TraesCS7D01G497300.1 | Wheat | plastid | 56.1 | 51.88 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 60.17 | 50.99 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 38.66 | 47.5 |
| PGSC0003DMT400073710 | Potato | nucleus | 26.45 | 41.94 |
| Bra019123.1-P | Field mustard | nucleus | 23.55 | 41.75 |
| KRH61669 | Soybean | nucleus | 26.16 | 40.91 |
| Solyc12g042590.1.1 | Tomato | nucleus | 25.58 | 40.74 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 36.63 | 40.51 |
| KRH47344 | Soybean | nucleus | 36.63 | 40.51 |
| CDY22299 | Canola | nucleus | 34.01 | 40.34 |
| CDY67287 | Canola | nucleus | 34.01 | 40.34 |
| Bra008435.1-P | Field mustard | nucleus | 34.01 | 40.34 |
| KRH23643 | Soybean | nucleus | 36.05 | 40.13 |
| Solyc08g067340.2.1 | Tomato | nucleus | 29.07 | 39.53 |
| CDX87347 | Canola | nucleus | 34.01 | 39.0 |
| Bra035148.1-P | Field mustard | nucleus | 34.01 | 39.0 |
| KRH44560 | Soybean | nucleus | 35.47 | 38.98 |
| CDX88573 | Canola | nucleus | 34.01 | 38.87 |
| AT1G80840.1 | Thale cress | nucleus | 34.01 | 38.74 |
| CDX79347 | Canola | nucleus | 33.43 | 38.59 |
| Bra003588.1-P | Field mustard | nucleus | 33.14 | 38.38 |
| CDX67971 | Canola | nucleus | 33.14 | 38.38 |
| PGSC0003DMT400019061 | Potato | nucleus | 28.2 | 38.34 |
| KRH15674 | Soybean | nucleus | 31.4 | 38.3 |
| Solyc08g067360.2.1 | Tomato | nucleus | 28.49 | 37.98 |
| CDX75196 | Canola | nucleus | 31.1 | 37.81 |
| PGSC0003DMT400019058 | Potato | nucleus | 28.49 | 37.55 |
| CDX72327 | Canola | nucleus | 31.1 | 37.54 |
| Zm00001d020492_P001 | Maize | nucleus | 32.85 | 37.42 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 33.72 | 36.59 |
| KRH09652 | Soybean | nucleus | 34.88 | 36.36 |
| Bra010220.1-P | Field mustard | nucleus | 31.98 | 35.71 |
| AT2G25000.1 | Thale cress | nucleus | 27.91 | 35.42 |
| Zm00001d020495_P001 | Maize | nucleus | 27.33 | 35.34 |
| CDY39879 | Canola | nucleus | 31.4 | 35.18 |
| AT4G31800.1 | Thale cress | nucleus | 31.69 | 35.16 |
| CDX68787 | Canola | nucleus | 31.98 | 34.48 |
| Bra011299.1-P | Field mustard | nucleus | 31.69 | 34.38 |
| KRH05350 | Soybean | nucleus | 31.1 | 34.29 |
| Solyc03g116890.2.1 | Tomato | nucleus | 34.59 | 34.0 |
| Solyc06g068460.2.1 | Tomato | nucleus | 34.3 | 32.78 |
| PGSC0003DMT400073396 | Potato | nucleus | 34.3 | 32.78 |
| PGSC0003DMT400051047 | Potato | nucleus | 33.72 | 32.68 |
| KRH52329 | Soybean | nucleus | 28.2 | 31.39 |
| Zm00001d005749_P001 | Maize | nucleus | 31.69 | 31.05 |
| Bra023983.1-P | Field mustard | nucleus | 30.52 | 30.43 |
| CDY70096 | Canola | nucleus | 30.52 | 30.43 |
| Zm00001d045375_P001 | Maize | nucleus | 14.24 | 19.6 |
| Zm00001d011237_P001 | Maize | nucleus | 16.86 | 19.46 |
| Zm00001d024768_P001 | Maize | nucleus | 24.71 | 15.54 |
| Zm00001d008794_P001 | Maize | nucleus | 22.67 | 14.44 |
| Zm00001d039532_P001 | Maize | nucleus | 22.97 | 14.44 |
| Zm00001d008190_P001 | Maize | nucleus | 20.93 | 14.2 |
| Zm00001d040554_P001 | Maize | nucleus | 23.55 | 13.94 |
| Zm00001d009595_P001 | Maize | nucleus | 24.42 | 13.77 |
| Zm00001d039245_P001 | Maize | nucleus | 21.22 | 13.49 |
| Zm00001d018203_P001 | Maize | nucleus | 22.09 | 13.13 |
| Zm00001d039044_P001 | Maize | nucleus | 23.26 | 12.74 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A1D6LQL7 | ProteinID:AQK81779.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF33 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000845991E | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | EnsemblPlantsGene:Zm00001d036726 | EnsemblPlants:Zm00001d036726_P001 | EnsemblPlants:Zm00001d036726_T001 |
| SEG:seg | : | : | : | : | : |
Description
WRKY-transcription factor 114Putative WRKY DNA-binding domain superfamily protein
Coordinates
chr6:+:99175591..99177057
Molecular Weight (calculated)
36581.0 Da
IEP (calculated)
9.693
GRAVY (calculated)
-0.560
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPWIGQPSL SLDLNVGLPT AARPPATTTT AEVLVEEDFL AVKKDREVQV QALEAELRRA GEENRRLSDM LRAVVAKYAE LQGQVNGMAA PVVSTAGNSA
101: AAAAANRQSS ASSDDGGSAA GSPSRKRPVR SDSLDTAPQH HNRKPPSPYA AAPAPGPDQM ECTSAAVTIV AAAAAYHHEP ARRIREAERK PKVSRRFVHA
201: DPSDLSLVVK DGYQWRKYGQ KVTKDNPCPR AYFRCSLAPS CPVKKKVQRS ADDSAVLVAT YEGEHNHARP PQHDGGAKRS SAPPAGEAAR PPAPLPLQKQ
301: EAGPSSEVAR KNLAEHMAVT LTRDPGFKAA LVSALSGRIL DQGL
101: AAAAANRQSS ASSDDGGSAA GSPSRKRPVR SDSLDTAPQH HNRKPPSPYA AAPAPGPDQM ECTSAAVTIV AAAAAYHHEP ARRIREAERK PKVSRRFVHA
201: DPSDLSLVVK DGYQWRKYGQ KVTKDNPCPR AYFRCSLAPS CPVKKKVQRS ADDSAVLVAT YEGEHNHARP PQHDGGAKRS SAPPAGEAAR PPAPLPLQKQ
301: EAGPSSEVAR KNLAEHMAVT LTRDPGFKAA LVSALSGRIL DQGL
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.