Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G418600.1 | Wheat | nucleus | 78.05 | 88.58 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 86.28 | 86.81 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 84.15 | 86.52 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 89.63 | 84.48 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 82.01 | 82.26 |
| TraesCS7D01G497300.1 | Wheat | plastid | 89.33 | 78.76 |
| Os06t0649000-01 | Rice | nucleus | 60.67 | 59.05 |
| Zm00001d036726_P001 | Maize | nucleus | 59.45 | 56.69 |
| EER90124 | Sorghum | nucleus | 58.23 | 55.85 |
| Zm00001d046805_P001 | Maize | nucleus | 59.15 | 55.27 |
| EER88729 | Sorghum | nucleus | 58.23 | 54.89 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 54.88 | 51.72 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 39.33 | 46.07 |
| Bra019123.1-P | Field mustard | nucleus | 25.61 | 43.3 |
| PGSC0003DMT400073710 | Potato | nucleus | 26.52 | 40.09 |
| KRH61669 | Soybean | nucleus | 26.83 | 40.0 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 37.8 | 39.87 |
| Solyc12g042590.1.1 | Tomato | nucleus | 26.22 | 39.81 |
| KRH23643 | Soybean | nucleus | 37.5 | 39.81 |
| Solyc08g067340.2.1 | Tomato | nucleus | 30.49 | 39.53 |
| KRH47344 | Soybean | nucleus | 37.2 | 39.23 |
| PGSC0003DMT400019058 | Potato | nucleus | 31.1 | 39.08 |
| CDX67971 | Canola | nucleus | 35.37 | 39.06 |
| Bra003588.1-P | Field mustard | nucleus | 35.37 | 39.06 |
| KRH15674 | Soybean | nucleus | 33.54 | 39.01 |
| Bra035148.1-P | Field mustard | nucleus | 35.67 | 39.0 |
| CDX87347 | Canola | nucleus | 35.67 | 39.0 |
| Bra008435.1-P | Field mustard | nucleus | 34.45 | 38.97 |
| CDY22299 | Canola | nucleus | 34.45 | 38.97 |
| PGSC0003DMT400019061 | Potato | nucleus | 29.88 | 38.74 |
| CDY67287 | Canola | nucleus | 34.15 | 38.62 |
| CDX72327 | Canola | nucleus | 33.54 | 38.6 |
| CDX88573 | Canola | nucleus | 35.37 | 38.54 |
| AT1G80840.1 | Thale cress | nucleus | 35.37 | 38.41 |
| AT2G25000.1 | Thale cress | nucleus | 31.71 | 38.38 |
| Solyc08g067360.2.1 | Tomato | nucleus | 29.88 | 37.98 |
| CDX79347 | Canola | nucleus | 34.45 | 37.92 |
| CDX75196 | Canola | nucleus | 32.62 | 37.81 |
| KRH44560 | Soybean | nucleus | 35.98 | 37.7 |
| KRH09652 | Soybean | nucleus | 37.2 | 36.97 |
| Bra010220.1-P | Field mustard | nucleus | 33.54 | 35.71 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 34.45 | 35.65 |
| CDY39879 | Canola | nucleus | 33.23 | 35.5 |
| CDX68787 | Canola | nucleus | 34.45 | 35.42 |
| Bra011299.1-P | Field mustard | nucleus | 33.84 | 35.02 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 28.35 | 34.32 |
| AT4G31800.1 | Thale cress | nucleus | 32.32 | 34.19 |
| KRH05350 | Soybean | nucleus | 32.32 | 33.97 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 33.54 | 33.23 |
| KRH52329 | Soybean | nucleus | 30.49 | 32.36 |
| Bra023983.1-P | Field mustard | nucleus | 33.23 | 31.59 |
| CDY70096 | Canola | nucleus | 33.23 | 31.59 |
| PGSC0003DMT400073396 | Potato | nucleus | 34.15 | 31.11 |
| Solyc06g068460.2.1 | Tomato | nucleus | 34.15 | 31.11 |
| Solyc03g116890.2.1 | Tomato | nucleus | 32.62 | 30.57 |
| PGSC0003DMT400051047 | Potato | nucleus | 32.32 | 29.86 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 32.93 | 29.11 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 22.26 | 14.84 |
| TraesCS1D01G412500.1 | Wheat | nucleus | 24.09 | 13.37 |
| TraesCS6D01G306300.1 | Wheat | nucleus | 21.34 | 12.52 |
| TraesCS7D01G092600.1 | Wheat | nucleus | 22.56 | 12.23 |
| TraesCS7D01G092500.2 | Wheat | nucleus | 21.95 | 12.18 |
| TraesCS3D01G173300.2 | Wheat | plastid | 23.17 | 11.95 |
| TraesCS7D01G092400.1 | Wheat | nucleus | 20.12 | 10.91 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 20.12 | 10.91 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF33 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS7D01G497700 | EnsemblPlants:TraesCS7D01G497700.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7D:+:604475181..604476481
Molecular Weight (calculated)
35122.4 Da
IEP (calculated)
9.407
GRAVY (calculated)
-0.523
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEQWMIGQT SLSLGLNVGG PTVRRGAPPV TKVLVEEDFM SSRKNHEVEA LEAELRHVGE ENGRLTDMLR ALVAKYADLQ GKVSGMMAAA AAANSHHQSS
101: TTSEGGSSAS ATRKRARSDS LDTASRNLSP PLAAAGSSGR FAVSVTVGPD QAECTSVHEP CNSKRVRADE CKASRVSKLY VHADPSDLSL VVKDGYQWRK
201: YGQKVTKDNP CPRAYFRCSF APSCHVKKKV QRSAEDKAVL VATYDGDHNH APPPKQQGSG GRKSGDAAAV RVSAAPVLVQ QQRKQEPSTA EQVDDRMNLV
301: EQMAATLTRD PGFKAALVSA LSSRIPVA
101: TTSEGGSSAS ATRKRARSDS LDTASRNLSP PLAAAGSSGR FAVSVTVGPD QAECTSVHEP CNSKRVRADE CKASRVSKLY VHADPSDLSL VVKDGYQWRK
201: YGQKVTKDNP CPRAYFRCSF APSCHVKKKV QRSAEDKAVL VATYDGDHNH APPPKQQGSG GRKSGDAAAV RVSAAPVLVQ QQRKQEPSTA EQVDDRMNLV
301: EQMAATLTRD PGFKAALVSA LSSRIPVA
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.