Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008435.1-P | Field mustard | nucleus | 85.76 | 89.31 |
| CDY22299 | Canola | nucleus | 85.43 | 88.97 |
| CDY67287 | Canola | nucleus | 85.1 | 88.62 |
| Bra003588.1-P | Field mustard | nucleus | 86.42 | 87.88 |
| CDX67971 | Canola | nucleus | 86.09 | 87.54 |
| CDX88573 | Canola | nucleus | 86.42 | 86.71 |
| CDX79347 | Canola | nucleus | 85.43 | 86.58 |
| CDX87347 | Canola | nucleus | 85.1 | 85.67 |
| Bra035148.1-P | Field mustard | nucleus | 85.1 | 85.67 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 35.76 | 56.25 |
| KRH23643 | Soybean | nucleus | 56.62 | 55.34 |
| KRH47344 | Soybean | nucleus | 54.97 | 53.38 |
| KRH44560 | Soybean | nucleus | 55.3 | 53.35 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 54.3 | 52.73 |
| KRH09652 | Soybean | nucleus | 55.63 | 50.91 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 29.47 | 46.84 |
| GSMUA_Achr11P... | Banana | nucleus | 37.75 | 46.53 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 36.09 | 46.38 |
| Solyc03g116890.2.1 | Tomato | nucleus | 53.64 | 46.29 |
| GSMUA_Achr10P... | Banana | nucleus | 35.43 | 46.12 |
| PGSC0003DMT400051047 | Potato | nucleus | 53.64 | 45.63 |
| Solyc06g068460.2.1 | Tomato | nucleus | 50.99 | 42.78 |
| PGSC0003DMT400073396 | Potato | nucleus | 50.66 | 42.5 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 38.41 | 42.18 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 24.17 | 41.95 |
| AT4G31800.1 | Thale cress | nucleus | 43.05 | 41.94 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 38.41 | 41.43 |
| AT2G25000.1 | Thale cress | nucleus | 36.42 | 40.59 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 28.81 | 39.01 |
| GSMUA_Achr10P... | Banana | nucleus | 37.09 | 38.89 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 37.09 | 38.75 |
| Zm00001d020492_P001 | Maize | nucleus | 37.42 | 37.42 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 40.4 | 37.31 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 40.07 | 37.12 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 39.74 | 36.81 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 40.07 | 36.78 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 40.73 | 36.72 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 38.74 | 36.68 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 39.07 | 36.65 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 39.4 | 36.39 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 38.74 | 36.11 |
| Os09t0417600-02 | Rice | nucleus | 39.07 | 36.09 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 39.4 | 35.95 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 39.07 | 35.65 |
| Os02t0181300-01 | Rice | nucleus | 41.06 | 35.63 |
| Zm00001d053746_P001 | Maize | nucleus | 37.75 | 35.51 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 38.41 | 35.37 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 33.44 | 34.95 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 38.08 | 34.85 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 38.08 | 34.74 |
| Os06t0649000-01 | Rice | nucleus | 38.74 | 34.72 |
| EER98905 | Sorghum | nucleus, plastid | 37.42 | 34.56 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 30.79 | 34.32 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 39.4 | 34.2 |
| Zm00001d036726_P001 | Maize | nucleus | 38.74 | 34.01 |
| EES04642 | Sorghum | nucleus | 40.4 | 33.52 |
| Zm00001d015515_P001 | Maize | nucleus | 38.41 | 33.43 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 38.74 | 33.43 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 38.41 | 33.33 |
| EER90124 | Sorghum | nucleus | 37.75 | 33.33 |
| Zm00001d046805_P001 | Maize | nucleus | 38.74 | 33.33 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 38.41 | 32.86 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 29.47 | 32.84 |
| Zm00001d020495_P001 | Maize | nucleus | 28.81 | 32.71 |
| EER88729 | Sorghum | nucleus | 37.42 | 32.47 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 38.08 | 32.39 |
| TraesCS7D01G497300.1 | Wheat | plastid | 39.74 | 32.26 |
| KXG35639 | Sorghum | nucleus | 31.46 | 32.2 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 38.08 | 31.0 |
| Zm00001d005749_P001 | Maize | nucleus | 35.43 | 30.48 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 38.41 | 29.67 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 39.07 | 29.06 |
| Os09t0417800-01 | Rice | nucleus | 30.46 | 28.93 |
| AT4G22070.1 | Thale cress | nucleus | 32.78 | 18.4 |
| AT1G69810.1 | Thale cress | nucleus | 23.51 | 18.35 |
| AT4G04450.1 | Thale cress | nucleus | 31.46 | 17.99 |
| AT4G01720.1 | Thale cress | nucleus | 28.15 | 17.38 |
| AT1G68150.1 | Thale cress | nucleus | 20.2 | 16.31 |
| AT1G62300.1 | Thale cress | nucleus | 29.8 | 16.27 |
| AT1G18860.1 | Thale cress | nucleus | 27.48 | 15.72 |
| AT5G15130.1 | Thale cress | nucleus | 26.49 | 14.6 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:844423 | ProteinID:AAF14671.1 | EMBL:AB493542 | ProteinID:AEE36457.1 |
| EMBL:AF480149 | ArrayExpress:AT1G80840 | EnsemblPlantsGene:AT1G80840 | RefSeq:AT1G80840 | TAIR:AT1G80840 | RefSeq:AT1G80840-TAIR-G |
| EnsemblPlants:AT1G80840.1 | TAIR:AT1G80840.1 | EMBL:BT001914 | UniProt:C0SV39 | GO:GO:0002237 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009611 | GO:GO:0009719 | GO:GO:0009751 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0031347 |
| GO:GO:0042742 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045892 | GO:GO:0050832 | InterPro:IPR003657 |
| InterPro:IPR036576 | RefSeq:NP_178199.1 | PFAM:PF03106 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025034 | PO:PO:0025281 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF3 | UniProt:Q9SAH7 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000000BD3F |
| Symbol:WRKY40 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
Coordinates
chr1:+:30383561..30385499
Molecular Weight (calculated)
33697.8 Da
IEP (calculated)
8.542
GRAVY (calculated)
-0.668
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.