Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04642 | Sorghum | nucleus | 79.54 | 75.82 |
| Zm00001d053746_P001 | Maize | nucleus | 69.16 | 74.77 |
| Os02t0181300-01 | Rice | nucleus | 70.03 | 69.83 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 70.03 | 69.83 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 69.45 | 68.86 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 69.16 | 67.99 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 68.88 | 67.32 |
| Zm00001d046805_P001 | Maize | nucleus | 56.2 | 55.56 |
| Zm00001d036726_P001 | Maize | nucleus | 55.04 | 55.52 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 39.48 | 48.93 |
| Bra019123.1-P | Field mustard | nucleus | 25.94 | 46.39 |
| Solyc08g067340.2.1 | Tomato | nucleus | 32.56 | 44.66 |
| PGSC0003DMT400019061 | Potato | nucleus | 31.99 | 43.87 |
| PGSC0003DMT400073710 | Potato | nucleus | 27.38 | 43.78 |
| KRH61669 | Soybean | nucleus | 27.09 | 42.73 |
| Solyc12g042590.1.1 | Tomato | nucleus | 26.51 | 42.59 |
| PGSC0003DMT400019058 | Potato | nucleus | 31.41 | 41.76 |
| Solyc08g067360.2.1 | Tomato | nucleus | 30.55 | 41.09 |
| KRH47344 | Soybean | nucleus | 36.6 | 40.84 |
| CDX72327 | Canola | nucleus | 33.43 | 40.7 |
| KRH23643 | Soybean | nucleus | 36.02 | 40.45 |
| CDY22299 | Canola | nucleus | 33.72 | 40.34 |
| Bra008435.1-P | Field mustard | nucleus | 33.72 | 40.34 |
| CDX75196 | Canola | nucleus | 32.85 | 40.28 |
| CDY67287 | Canola | nucleus | 33.43 | 40.0 |
| AT2G25000.1 | Thale cress | nucleus | 31.12 | 39.85 |
| KRH44560 | Soybean | nucleus | 35.73 | 39.62 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 35.45 | 39.55 |
| KRH15674 | Soybean | nucleus | 31.99 | 39.36 |
| Bra035148.1-P | Field mustard | nucleus | 33.43 | 38.67 |
| CDX87347 | Canola | nucleus | 33.43 | 38.67 |
| CDX88573 | Canola | nucleus | 33.43 | 38.54 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 35.16 | 38.49 |
| AT1G80840.1 | Thale cress | nucleus | 33.43 | 38.41 |
| CDY39879 | Canola | nucleus | 33.72 | 38.11 |
| Bra003588.1-P | Field mustard | nucleus | 32.56 | 38.05 |
| CDX67971 | Canola | nucleus | 32.56 | 38.05 |
| Bra010220.1-P | Field mustard | nucleus | 33.43 | 37.66 |
| CDX79347 | Canola | nucleus | 32.28 | 37.58 |
| Bra011299.1-P | Field mustard | nucleus | 34.01 | 37.22 |
| AT4G31800.1 | Thale cress | nucleus | 33.14 | 37.1 |
| CDX68787 | Canola | nucleus | 34.01 | 36.99 |
| KRH05350 | Soybean | nucleus | 32.85 | 36.54 |
| Zm00001d020492_P001 | Maize | nucleus | 31.41 | 36.09 |
| KRH09652 | Soybean | nucleus | 34.29 | 36.06 |
| Zm00001d020495_P001 | Maize | nucleus | 26.22 | 34.21 |
| Solyc06g068460.2.1 | Tomato | nucleus | 34.29 | 33.06 |
| KRH52329 | Soybean | nucleus | 29.39 | 33.01 |
| PGSC0003DMT400073396 | Potato | nucleus | 34.01 | 32.78 |
| Bra023983.1-P | Field mustard | nucleus | 32.56 | 32.75 |
| CDY70096 | Canola | nucleus | 32.56 | 32.75 |
| Solyc03g116890.2.1 | Tomato | nucleus | 32.85 | 32.57 |
| PGSC0003DMT400051047 | Potato | nucleus | 32.56 | 31.83 |
| Zm00001d005749_P001 | Maize | nucleus | 29.11 | 28.77 |
| Zm00001d011237_P001 | Maize | nucleus | 17.58 | 20.47 |
| Zm00001d045375_P001 | Maize | nucleus | 12.39 | 17.2 |
| Zm00001d024768_P001 | Maize | nucleus | 25.07 | 15.9 |
| Zm00001d008190_P001 | Maize | nucleus | 22.48 | 15.38 |
| Zm00001d040554_P001 | Maize | nucleus | 25.07 | 14.97 |
| Zm00001d008794_P001 | Maize | nucleus | 22.48 | 14.44 |
| Zm00001d039532_P001 | Maize | nucleus | 21.9 | 13.89 |
| Zm00001d039245_P001 | Maize | nucleus | 21.61 | 13.86 |
| Zm00001d018203_P001 | Maize | nucleus | 22.19 | 13.3 |
| Zm00001d009595_P001 | Maize | nucleus | 22.77 | 12.95 |
| Zm00001d039044_P001 | Maize | nucleus | 21.9 | 12.1 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A1D6H2L2 | ProteinID:AQK69076.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF9 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI0008457478 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | EnsemblPlantsGene:Zm00001d015515 | EnsemblPlants:Zm00001d015515_P001 | EnsemblPlants:Zm00001d015515_T001 |
| SEG:seg | : | : | : | : | : |
Description
WRKY-transcription factor 48Probable WRKY transcription factor 40
Coordinates
chr5:+:95183890..95185688
Molecular Weight (calculated)
37645.7 Da
IEP (calculated)
8.402
GRAVY (calculated)
-0.602
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPWISSQPS LSLDLRVGLP PLSLHHQAPV AVALPRPKLL VEENFLLPPP KKEPEVAALE TELQRMGEEN RRLAEALAEV ASKYEALRGQ YTEMVAAAAT
101: ACGNHPSSTS EGGSVSPSRK RKSESTDTAP PAQQLLHQHY PAVAPDQTEC TSGEPCKRIR EAECKPRVSK LHVHADPADL SLVVKDGYQW RKYGQKVTKD
201: NPCPRAYFRC SFAPACPVKK KVQRSADDPT ILVATYEGDH NHGQPPPQAQ APHDGSSPGA SKKPPSPPRP VAAAPAPLHH QQVQQHQQQQ AVGAVKCEPP
301: VAAAASELIR RNLAEQMAMT LTRDPSFKAA FVTALSGRLF EMSPTKD
101: ACGNHPSSTS EGGSVSPSRK RKSESTDTAP PAQQLLHQHY PAVAPDQTEC TSGEPCKRIR EAECKPRVSK LHVHADPADL SLVVKDGYQW RKYGQKVTKD
201: NPCPRAYFRC SFAPACPVKK KVQRSADDPT ILVATYEGDH NHGQPPPQAQ APHDGSSPGA SKKPPSPPRP VAAAPAPLHH QQVQQHQQQQ AVGAVKCEPP
301: VAAAASELIR RNLAEQMAMT LTRDPSFKAA FVTALSGRLF EMSPTKD
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.