Factsheet for Zm00001d018203_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05866	Sorghum	nucleus	86.36	86.51
TraesCS6B01G357600.1	Wheat	nucleus	57.69	59.64
TraesCS6D01G306300.1	Wheat	nucleus	57.34	59.39
TraesCS6A01G326500.2	Wheat	nucleus	56.13	58.77
Os02t0770500-00	Rice	nucleus	65.63	58.55
HORVU6Hr1G079710.2	Barley	nucleus	58.2	54.35
GSMUA_Achr3P20290_001	Banana	nucleus	31.26	47.26
GSMUA_Achr7P18820_001	Banana	nucleus	36.1	46.55
GSMUA_Achr10P...	Banana	nucleus	36.79	44.47
KRH42243	Soybean	nucleus	13.82	44.2
CDX81493	Canola	nucleus	23.32	43.55
GSMUA_Achr6P02330_001	Banana	nucleus	27.12	42.55
Bra004285.1-P	Field mustard	nucleus	23.66	41.77
CDX96044	Canola	nucleus	23.49	41.46
CDY01891	Canola	nucleus	23.14	40.85
PGSC0003DMT400076591	Potato	nucleus	27.46	38.5
AT1G68150.1	Thale cress	nucleus	24.52	37.97
VIT_12s0055g00340.t01	Wine grape	nucleus	31.43	37.37
Solyc01g104550.2.1	Tomato	nucleus	30.22	36.84
KRH58361	Soybean	nucleus	29.53	35.26
Zm00001d011237_P001	Maize	nucleus	16.93	32.89
Zm00001d045375_P001	Maize	nucleus	12.78	29.6
Zm00001d020492_P001	Maize	nucleus	12.61	24.17
Zm00001d053746_P001	Maize	nucleus	13.13	23.68
Zm00001d008794_P001	Maize	nucleus	21.76	23.33
Zm00001d024768_P001	Maize	nucleus	21.76	23.03
Zm00001d039245_P001	Maize	nucleus	20.9	22.37
Zm00001d015515_P001	Maize	nucleus	13.3	22.19
Zm00001d020495_P001	Maize	nucleus	10.19	22.18
Zm00001d039532_P001	Maize	nucleus	20.9	22.12
Zm00001d036726_P001	Maize	nucleus	13.13	22.09
Zm00001d046805_P001	Maize	nucleus	13.3	21.94
Zm00001d008190_P001	Maize	nucleus	18.83	21.5
Zm00001d009595_P001	Maize	nucleus	21.42	20.33
Zm00001d040554_P001	Maize	nucleus	20.21	20.14
Zm00001d005749_P001	Maize	nucleus	11.92	19.66
Zm00001d039044_P001	Maize	nucleus	20.9	19.27

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1D6HLK7	ProteinID:AQK75274.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF34	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI00084458EA	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d018203	EnsemblPlants:Zm00001d018203_P001	EnsemblPlants:Zm00001d018203_T001
SEG:seg	:	:	:	:	:

Description

Probable WRKY transcription factor 9

Coordinates

chr5:+:216529933..216532619

Molecular Weight (calculated)

61496.1 Da

IEP (calculated)

5.112

GRAVY (calculated)

-0.773

Length

579 amino acids

Sequence
(BLAST)

001: MSSKKKRAAI DLSLEAERSG EGHSGGGGKG DRHRGKDNGE VDKKEEQFKE QREAPEEGTG EEKVVVEVVV DQGRDDTREI KYRTQQEEEM GNDKQPAEDA
101: HGDDESDGGE TRAQDKHVVE AAGNGDGDDS YTTMVQDEVS AMQEEMEKMK EENRMLRRVV DRTMRDYDEL KKKVEACYQQ QQADEPKEPE VFLSLGATAA
201: GTGGGFAEPK RKERQTVRRP SAGSDDTDDD TKEDRLGLSL SLAASSYEEE KLGAGPAGHD LEEASVAGAD RKAKGYALLE SSKLEAPAPP AAAGDLAAAG
301: ITSQSVNPAN RKTRVSVRVR CQGPTMNDGC QWRKYGQKVA KGNPCPRAYY RCTVAPGCPV RKQVQRCLED MSILVTTYEG THNHPLPIGA TAMASTTSAA
401: ATFMLLSSTS SSSATSEVRG GSAAPSYLSP PYLLNSTSHH PAASPLLGAQ PSSSMPSAPA GVANGVQHLN MFGHSSMLAQ QAPHFSSKYP WSSDPSQSQG
501: IGGGLPAGSK RPFWSTGGDE KTATLPDNVG AVMADPSKFS VAIAAALNSY IGKDGQVVGG KDGESSSNKW GVVESLPPP

Best Arabidopsis Sequence Match ( AT1G68150.1 )
(BLAST)

001: MGFDFSTSKS KAKRQKRIEV RFASPLMGID LSLKLEAEEK KKEIEGSKHS RENKEDEEHD ASGDEDEQMV KEDEDDSSSL GLRTREEENE REELLQLQIQ
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM

Arabidopsis Description

WRKY9WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.