Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98905 | Sorghum | nucleus, plastid | 66.38 | 71.25 |
| Zm00001d020492_P001 | Maize | nucleus | 60.97 | 70.86 |
| Os09t0417600-02 | Rice | nucleus | 52.99 | 56.88 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 52.71 | 56.06 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 52.42 | 55.59 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 50.71 | 53.78 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 49.86 | 52.87 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 51.85 | 49.06 |
| Bra019123.1-P | Field mustard | nucleus | 24.79 | 44.85 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 48.43 | 43.48 |
| Solyc12g042590.1.1 | Tomato | nucleus | 24.22 | 39.35 |
| Zm00001d020495_P001 | Maize | nucleus | 29.34 | 38.72 |
| PGSC0003DMT400073710 | Potato | nucleus | 23.93 | 38.71 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 34.19 | 38.59 |
| Bra008435.1-P | Field mustard | nucleus | 30.48 | 36.9 |
| CDY22299 | Canola | nucleus | 30.48 | 36.9 |
| CDY67287 | Canola | nucleus | 30.2 | 36.55 |
| KRH23643 | Soybean | nucleus | 31.91 | 36.25 |
| AT1G80840.1 | Thale cress | nucleus | 30.48 | 35.43 |
| KRH47344 | Soybean | nucleus | 31.34 | 35.37 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 29.06 | 35.29 |
| Bra003588.1-P | Field mustard | nucleus | 29.63 | 35.02 |
| CDX67971 | Canola | nucleus | 29.63 | 35.02 |
| CDX88573 | Canola | nucleus | 29.91 | 34.88 |
| KRH44560 | Soybean | nucleus | 31.05 | 34.82 |
| CDX87347 | Canola | nucleus | 29.63 | 34.67 |
| Bra035148.1-P | Field mustard | nucleus | 29.63 | 34.67 |
| CDX79347 | Canola | nucleus | 29.34 | 34.56 |
| KRH61669 | Soybean | nucleus | 21.37 | 34.09 |
| Solyc08g067340.2.1 | Tomato | nucleus | 24.5 | 33.99 |
| KRH15674 | Soybean | nucleus | 27.07 | 33.69 |
| PGSC0003DMT400019061 | Potato | nucleus | 24.22 | 33.6 |
| CDX72327 | Canola | nucleus | 27.07 | 33.33 |
| PGSC0003DMT400019058 | Potato | nucleus | 24.79 | 33.33 |
| KRH09652 | Soybean | nucleus | 31.05 | 33.03 |
| Solyc08g067360.2.1 | Tomato | nucleus | 24.22 | 32.95 |
| CDX75196 | Canola | nucleus | 26.5 | 32.86 |
| AT2G25000.1 | Thale cress | nucleus | 24.79 | 32.1 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 28.77 | 31.86 |
| Zm00001d036726_P001 | Maize | nucleus | 31.05 | 31.69 |
| Zm00001d046805_P001 | Maize | nucleus | 31.05 | 31.05 |
| AT4G31800.1 | Thale cress | nucleus | 27.35 | 30.97 |
| Bra010220.1-P | Field mustard | nucleus | 27.07 | 30.84 |
| Zm00001d053746_P001 | Maize | nucleus | 27.92 | 30.53 |
| CDY39879 | Canola | nucleus | 26.5 | 30.29 |
| PGSC0003DMT400073396 | Potato | nucleus | 31.05 | 30.28 |
| KRH05350 | Soybean | nucleus | 26.78 | 30.13 |
| Solyc06g068460.2.1 | Tomato | nucleus | 30.77 | 30.0 |
| Bra011299.1-P | Field mustard | nucleus | 26.5 | 29.34 |
| CDX68787 | Canola | nucleus | 26.5 | 29.15 |
| Solyc03g116890.2.1 | Tomato | nucleus | 29.06 | 29.14 |
| Zm00001d015515_P001 | Maize | nucleus | 28.77 | 29.11 |
| PGSC0003DMT400051047 | Potato | nucleus | 29.34 | 29.01 |
| KRH52329 | Soybean | nucleus | 24.5 | 27.83 |
| CDY70096 | Canola | nucleus | 27.07 | 27.54 |
| Bra023983.1-P | Field mustard | nucleus | 27.07 | 27.54 |
| Zm00001d011237_P001 | Maize | nucleus | 15.38 | 18.12 |
| Zm00001d008794_P001 | Maize | nucleus | 22.79 | 14.81 |
| Zm00001d045375_P001 | Maize | nucleus | 10.54 | 14.8 |
| Zm00001d008190_P001 | Maize | nucleus | 21.37 | 14.79 |
| Zm00001d039532_P001 | Maize | nucleus | 21.94 | 14.08 |
| Zm00001d040554_P001 | Maize | nucleus | 23.08 | 13.94 |
| Zm00001d039245_P001 | Maize | nucleus | 21.37 | 13.86 |
| Zm00001d024768_P001 | Maize | nucleus | 20.8 | 13.35 |
| Zm00001d009595_P001 | Maize | nucleus | 23.08 | 13.28 |
| Zm00001d039044_P001 | Maize | nucleus | 22.22 | 12.42 |
| Zm00001d018203_P001 | Maize | nucleus | 19.66 | 11.92 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A1D6EPU9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | ProteinID:ONM21796.1 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF3 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00084235A9 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | EnsemblPlantsGene:Zm00001d005749 | EnsemblPlants:Zm00001d005749_P001 | EnsemblPlants:Zm00001d005749_T001 | SEG:seg |
Description
WRKY-transcription factor 55Probable WRKY transcription factor 40
Coordinates
chr2:+:186040975..186042528
Molecular Weight (calculated)
37651.2 Da
IEP (calculated)
8.945
GRAVY (calculated)
-0.592
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLMDSARRA GCSPVCLDLI VGLSPSSDPE TTADSQRLEL DRPAAGCRAT SSLSDEQVTD RPTDRLLAAR LPSWLRARVV LVPEPIGTGV ATHDHDDAVC
101: DRRGPWRPGS PRSARRTGGS PRRSPTCTAP RHHHHASGRK KSRDSLEAPS NSSDGGKTTD HADEATCRRV KVARARVCTR IDPSDATTLA VKDGYQWRKY
201: GQKVTRDNPS PRAYFRCAYG PSCPVKKKVQ RSAEDSSVLV ATYEGEHNHP CPTRAGDLPS SATASGSVPR SISNSINSSG PAITLDLTMN GAGGVRVLEG
301: AEAPDLRKLC QEIASPDFRT ALVEQMARSL TKDCKFTDAL AAAILQQLPG P
101: DRRGPWRPGS PRSARRTGGS PRRSPTCTAP RHHHHASGRK KSRDSLEAPS NSSDGGKTTD HADEATCRRV KVARARVCTR IDPSDATTLA VKDGYQWRKY
201: GQKVTRDNPS PRAYFRCAYG PSCPVKKKVQ RSAEDSSVLV ATYEGEHNHP CPTRAGDLPS SATASGSVPR SISNSINSSG PAITLDLTMN GAGGVRVLEG
301: AEAPDLRKLC QEIASPDFRT ALVEQMARSL TKDCKFTDAL AAAILQQLPG P
001: MLARVCESYN ELHNHLEKLQ SRQSPEIEQT DIPIKKRKQD PDEFLGFPIG LSSGKTENSS SNEDHHHHHQ QHEQKNQLLS CKRPVTDSFN KAKVSTVYVP
101: TETSDTSLTV KDGFQWRKYG QKVTRDNPSP RAYFRCSFAP SCPVKKKVQR SAEDPSLLVA TYEGTHNHLG PNASEGDATS QGGSSTVTLD LVNGCHRLAL
201: EKNERDNTMQ EVLIQQMASS LTKDSKFTAA LAAAISGRLM EQSRT
101: TETSDTSLTV KDGFQWRKYG QKVTRDNPSP RAYFRCSFAP SCPVKKKVQR SAEDPSLLVA TYEGTHNHLG PNASEGDATS QGGSSTVTLD LVNGCHRLAL
201: EKNERDNTMQ EVLIQQMASS LTKDSKFTAA LAAAISGRLM EQSRT
Arabidopsis Description
WRKY18WRKY like transcription factor [Source:UniProtKB/TrEMBL;Acc:Q0WTZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.