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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d040274_P001 Maize cytosol 96.98 97.16
KXG32187 Sorghum cytosol 94.72 95.08
Os01t0253300-01 Rice cytosol 88.87 89.54
TraesCS3D01G178500.1 Wheat cytosol 88.3 89.31
TraesCS3A01G172000.1 Wheat golgi, nucleus 88.3 89.31
HORVU3Hr1G034750.5 Barley cytosol 88.3 87.8
TraesCS3B01G202800.2 Wheat cytosol 83.96 82.87
VIT_07s0005g01100.t01 Wine grape cytosol 81.13 81.29
PGSC0003DMT400076860 Potato cytosol 80.57 80.72
PGSC0003DMT400018802 Potato cytosol 78.3 78.75
Solyc06g009750.2.1 Tomato nucleus 78.11 78.56
Zm00001d037606_P001 Maize cytosol 77.74 78.03
Solyc08g041890.2.1 Tomato nucleus 80.57 74.0
Zm00001d042015_P001 Maize cytosol 23.02 73.49
Zm00001d009850_P002 Maize cytosol 77.36 71.18
AT4G02150.1 Thale cress cytosol 70.57 70.43
CDY01921 Canola cytosol 70.19 70.06
CDX97257 Canola cytosol 69.62 69.49
Bra008559.1-P Field mustard cytosol 69.62 69.49
AT1G02690.2 Thale cress cytosol 70.57 69.39
Bra033342.1-P Field mustard cytosol 65.47 66.6
CDX89948 Canola cytosol 65.28 66.41
CDY64806 Canola cytosol 64.72 66.22
CDX90948 Canola cytosol 63.96 65.44
Bra000891.1-P Field mustard cytosol 63.77 65.25
Zm00001d040153_P004 Maize cytosol 20.19 58.47
CDY15260 Canola cytosol 65.47 44.77
Zm00001d022536_P008 Maize cytosol 46.79 43.66
PGSC0003DMT400076768 Potato cytosol, extracellular, mitochondrion, plastid 6.79 40.45
Zm00001d024033_P002 Maize plastid 15.28 37.33
Zm00001d008640_P002 Maize plastid 29.62 29.85
Protein Annotations
Gene3D:1.20.5.690Gene3D:1.25.10.10MapMan:23.5.1.3UniProt:A0A1D6FC42ProteinID:AQK89618.1InterPro:ARM-like
InterPro:ARM-type_foldInterPro:Arm_3InterPro:Armadilloncoils:CoilGO:GO:0003674GO:GO:0005215
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005737GO:GO:0006606GO:GO:0006810GO:GO:0008150GO:GO:0008565GO:GO:0015031
GO:GO:0061608InterPro:IPR000225InterPro:IPR002652InterPro:IPR011989InterPro:IPR036975InterPro:Importin-a_IBB
InterPro:Importin-a_IBB_sfInterPro:Importing_su_alphaPFAM:PF00514PFAM:PF01749PFAM:PF16186PIRSF:PIRSF005673
PFscan:PS50176PFscan:PS51214PANTHER:PTHR23316PANTHER:PTHR23316:SF22SMART:SM00185SUPFAM:SSF48371
UniParc:UPI0008436142EnsemblPlantsGene:Zm00001d008345EnsemblPlants:Zm00001d008345_P003EnsemblPlants:Zm00001d008345_T003SEG:seg:
Description
Importin alpha-1b subunit%2C mRNA
Coordinates
chr8:-:5938392..5944490
Molecular Weight (calculated)
58147.6 Da
IEP (calculated)
5.041
GRAVY (calculated)
-0.248
Length
530 amino acids
Sequence
(BLAST)
001: MSLRPSERVE VRRNRYKVAV DAEEGRRRRE DNMVEIRKSR REESLLKRRR EGLQAQVPAP PSGVEKKLES LPAMVSGVYS DDNNLQLEAT TQFRKLLSIE
101: RSPPIEEVIK TGVVPRFVQS LTREDFPQLQ FEAAWALTNI ASGTSENTKA VIDHGAVPIF VKLLGSGSDD VREQAVWALG NVAGDSPKCR DLVLANGALM
201: PLLAQLNEHV KLSMLRNATW TLSNFCRGKP QPSFDQTKPA LPALARLIHS NDEEVLTDAC WALSYLSDGT NDKIQAVIEA GVCPRLVELL LTCSHPSPSV
301: LIPALRTVGN IVTGDDLQTQ CIIDHQALPR LLNLLTQNHK KSIKKEACWT ISNITAGNKD QIQAVISAGI IAPLLQLLQT AEFDIKKEAA WAISNATSGG
401: SHEQIKYLVS EGCIKPLCDL LVCPDPRIVT VCLEGLENIL KVGQHDKTMG ATGDTNVLAQ MIDEAEGLEK IENLQSHDNN EIYEKAVKLL ETYWMEEEDD
501: AMATAGEAAP AVFDFNQGGN PPAAGGLNFN
Best Arabidopsis Sequence Match ( AT4G16143.1 )
(BLAST)
001: MSLRPNAKTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKSK REESLQKKRR EGLQANQLPQ FAPSPVPASS TVEKKLESLP AMVGGVWSDD RSLQLEATTQ
101: FRKLLSIERS PPIEEVIDAG VVPRFVEFLT REDYPQLQFE AAWALTNIAS GTSENTKVVI EHGAVPIFVQ LLASQSDDVR EQAVWALGNV AGDSPRCRDL
201: VLGQGALIPL LSQLNEHAKL SMLRNATWTL SNFCRGKPQP PFDQVRPALP ALERLIHSTD EEVLTDACWA LSYLSDGTND KIQSVIEAGV VPRLVELLQH
301: QSPSVLIPAL RSIGNIVTGD DLQTQCVISH GALLSLLSLL THNHKKSIKK EACWTISNIT AGNRDQIQAV CEAGLICPLV NLLQNAEFDI KKEAAWAISN
401: ATSGGSPDQI KYMVEQGVVK PLCDLLVCPD PRIITVCLEG LENILKVGEA EKVTGNTGDV NFYAQLIDDA EGLEKIENLQ SHDNSEIYEK AVKILETYWL
501: EEEDETLPPG DPSAQGFQFG GGNDAAVPPG GFNFQ
Arabidopsis Description
IMPA2Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:F4JL11]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.