Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01921 | Canola | cytosol | 84.18 | 84.18 |
| CDX97257 | Canola | cytosol | 83.99 | 83.99 |
| Bra008559.1-P | Field mustard | cytosol | 83.99 | 83.99 |
| CDY64806 | Canola | cytosol | 74.76 | 76.64 |
| CDX90948 | Canola | cytosol | 74.01 | 75.87 |
| VIT_07s0005g01100.t01 | Wine grape | cytosol | 75.52 | 75.8 |
| Bra000891.1-P | Field mustard | cytosol | 73.82 | 75.68 |
| AT1G02690.2 | Thale cress | cytosol | 74.76 | 73.65 |
| Solyc06g009750.2.1 | Tomato | nucleus | 71.75 | 72.3 |
| PGSC0003DMT400018802 | Potato | cytosol | 71.75 | 72.3 |
| TraesCS3D01G178500.1 | Wheat | cytosol | 70.81 | 71.76 |
| TraesCS3A01G172000.1 | Wheat | golgi, nucleus | 70.81 | 71.76 |
| Os01t0253300-01 | Rice | cytosol | 70.81 | 71.48 |
| AT4G16143.2 | Thale cress | cytosol | 71.94 | 71.4 |
| KXG32187 | Sorghum | cytosol | 70.81 | 71.21 |
| Zm00001d008345_P003 | Maize | cytosol | 70.43 | 70.57 |
| HORVU3Hr1G034750.5 | Barley | cytosol | 70.81 | 70.54 |
| Zm00001d040274_P001 | Maize | cytosol | 70.06 | 70.32 |
| AT3G06720.2 | Thale cress | cytosol | 70.43 | 70.3 |
| TraesCS3B01G202800.2 | Wheat | cytosol | 68.93 | 68.16 |
| AT1G09270.1 | Thale cress | cytosol | 65.91 | 65.06 |
| AT5G49310.1 | Thale cress | cytosol | 58.0 | 59.34 |
| AT3G05720.1 | Thale cress | cytosol | 54.24 | 54.55 |
| AT1G32880.1 | Thale cress | cytosol | 17.7 | 51.37 |
| AT5G52000.1 | Thale cress | cytosol | 41.81 | 50.34 |
| AT5G49305.2 | Thale cress | cytosol | 33.52 | 46.35 |
| PGSC0003DMT400076768 | Potato | cytosol, extracellular, mitochondrion, plastid | 6.21 | 37.08 |
| AT5G03070.1 | Thale cress | cytosol, plastid | 26.93 | 27.55 |
Protein Annotations
| Gene3D:1.20.5.690 | Gene3D:1.25.10.10 | MapMan:23.5.1.3 | PDB:4TNM | EntrezGene:827472 | ProteinID:AAC78706.1 |
| ProteinID:AEE82131.1 | EMBL:AF385693 | InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT4G02150 | EnsemblPlantsGene:AT4G02150 |
| RefSeq:AT4G02150 | TAIR:AT4G02150 | RefSeq:AT4G02150-TAIR-G | EnsemblPlants:AT4G02150.1 | TAIR:AT4G02150.1 | EMBL:AY081725 |
| InterPro:Arm_3 | InterPro:Armadillo | Unigene:At.5372 | ProteinID:CAB80708.1 | EMBL:DQ087970 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005643 | GO:GO:0005654 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006606 | GO:GO:0006607 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008139 |
| GO:GO:0008150 | GO:GO:0008565 | GO:GO:0015031 | GO:GO:0061608 | InterPro:IPR000225 | InterPro:IPR002652 |
| InterPro:IPR011989 | InterPro:IPR036975 | InterPro:Importin-a_IBB | InterPro:Importin-a_IBB_sf | InterPro:Importing_su_alpha | Symbol:MOS6 |
| RefSeq:NP_192124.1 | UniProt:O04294 | PFAM:PF00514 | PFAM:PF01749 | PFAM:PF16186 | PIRSF:PIRSF005673 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50176 | PFscan:PS51214 |
| PANTHER:PTHR23316 | PANTHER:PTHR23316:SF53 | SMART:SM00185 | SUPFAM:SSF48371 | UniParc:UPI000000113F | EMBL:Y09511 |
| EMBL:Y15225 | SEG:seg | : | : | : | : |
Description
IMPA3Importin subunit alpha-3 [Source:UniProtKB/Swiss-Prot;Acc:O04294]
Coordinates
chr4:-:950546..953690
Molecular Weight (calculated)
58619.5 Da
IEP (calculated)
4.528
GRAVY (calculated)
-0.286
Length
531 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLRPSAKTE VRRNRYKVAV DAEEGRRRRE DNLVEIRKNK REENLQKKRF TSSMAFGSAT GQTEQDLSSA NQLKDNLPAM VAGIWSEDSN SQLEATNLLR
101: KLLSIEQNPP INEVVQSGVV PRVVKFLSRD DFPKLQFEAA WALTNIASGT SENTNVIIES GAVPIFIQLL SSASEDVREQ AVWALGNVAG DSPKCRDLVL
201: SYGAMTPLLS QFNENTKLSM LRNATWTLSN FCRGKPPPAF EQTQPALPVL ERLVQSMDEE VLTDACWALS YLSDNSNDKI QAVIEAGVVP RLIQLLGHSS
301: PSVLIPALRT IGNIVTGDDL QTQMVLDQQA LPCLLNLLKN NYKKSIKKEA CWTISNITAG NADQIQAVID AGIIQSLVWV LQSAEFEVKK EAAWGISNAT
401: SGGTHDQIKF MVSQGCIKPL CDLLTCPDLK VVTVCLEALE NILVVGEAEK NLGHTGEDNL YAQMIDEAEG LEKIENLQSH DNNDIYDKAV KILETFWTED
501: NEEEGNDENH APQSGFQFGS TNVPPGQFNF I
101: KLLSIEQNPP INEVVQSGVV PRVVKFLSRD DFPKLQFEAA WALTNIASGT SENTNVIIES GAVPIFIQLL SSASEDVREQ AVWALGNVAG DSPKCRDLVL
201: SYGAMTPLLS QFNENTKLSM LRNATWTLSN FCRGKPPPAF EQTQPALPVL ERLVQSMDEE VLTDACWALS YLSDNSNDKI QAVIEAGVVP RLIQLLGHSS
301: PSVLIPALRT IGNIVTGDDL QTQMVLDQQA LPCLLNLLKN NYKKSIKKEA CWTISNITAG NADQIQAVID AGIIQSLVWV LQSAEFEVKK EAAWGISNAT
401: SGGTHDQIKF MVSQGCIKPL CDLLTCPDLK VVTVCLEALE NILVVGEAEK NLGHTGEDNL YAQMIDEAEG LEKIENLQSH DNNDIYDKAV KILETFWTED
501: NEEEGNDENH APQSGFQFGS TNVPPGQFNF I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.