Factsheet for HORVU3Hr1G034750.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G012460.1
HORVU1Hr1G045920.1
HORVU2Hr1G081670.3
HORVU2Hr1G091680.3
HORVU3Hr1G035450.7
HORVU3Hr1G065350.1
HORVU4Hr1G089540.2
HORVU5Hr1G009830.3
HORVU5Hr1G049880.1
HORVU5Hr1G121540.1
HORVU6Hr1G036810.5
HORVU6Hr1G038320.1
HORVU6Hr1G060700.5
HORVU7Hr1G067800.6

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02150.1	HORVU3Hr1G065350.1	AT1G06510.1	21798944
AT4G02150.1	HORVU6Hr1G038320.1	AT1G52560.1	21798944
AT4G02150.1	HORVU5Hr1G049880.1	AT2G23290.1	21798944
AT4G02150.1	HORVU1Hr1G045920.1	AT2G45820.1	21798944
AT4G02150.1	HORVU2Hr1G091680.3	AT2G45820.1	21798944
AT4G02150.1	HORVU4Hr1G089540.2	AT2G45820.1	21798944
AT4G02150.1	HORVU6Hr1G060700.5	AT2G45820.1	21798944
AT4G02150.1	HORVU7Hr1G067800.6	AT3G21215.1	21798944
AT4G02150.1	HORVU3Hr1G035450.7	AT4G15900.1	9765207
AT4G02150.1	HORVU0Hr1G012460.1	AT4G22240.1	21798944
AT4G02150.1	HORVU5Hr1G121540.1	AT4G24840.1	21798944
AT4G02150.1	HORVU6Hr1G036810.5	AT5G19960.1	21798944
AT4G02150.1	HORVU2Hr1G081670.3	AT5G47810.1	21798944
AT4G02150.1	HORVU5Hr1G009830.3	AT5G57120.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G178500.1	Wheat	cytosol	97.75	99.43
TraesCS3A01G172000.1	Wheat	golgi, nucleus	97.75	99.43
TraesCS3B01G202800.2	Wheat	cytosol	91.18	90.5
Os01t0253300-01	Rice	cytosol	88.37	89.54
KXG32187	Sorghum	cytosol	88.37	89.2
Zm00001d040274_P001	Maize	cytosol	87.99	88.66
Zm00001d008345_P003	Maize	cytosol	87.8	88.3
VIT_07s0005g01100.t01	Wine grape	cytosol	80.11	80.72
PGSC0003DMT400076860	Potato	cytosol	79.92	80.53
PGSC0003DMT400018802	Potato	cytosol	77.3	78.18
Solyc06g009750.2.1	Tomato	nucleus	77.11	77.99
Solyc08g041890.2.1	Tomato	nucleus	79.74	73.66
HORVU1Hr1G022750.2	Barley	plasma membrane	77.49	73.23
AT4G02150.1	Thale cress	cytosol	70.54	70.81
AT1G02690.2	Thale cress	cytosol	71.48	70.69
CDY01921	Canola	cytosol	69.42	69.68
CDX97257	Canola	cytosol	69.04	69.3
Bra008559.1-P	Field mustard	cytosol	69.04	69.3
Bra033342.1-P	Field mustard	cytosol	66.6	68.14
CDX89948	Canola	cytosol	66.42	67.95
CDY64806	Canola	cytosol	64.92	66.8
CDX90948	Canola	cytosol	63.79	65.64
Bra000891.1-P	Field mustard	cytosol	63.6	65.44
HORVU2Hr1G016300.1	Barley	cytosol	42.78	50.0
CDY15260	Canola	cytosol	66.04	45.42
PGSC0003DMT400076768	Potato	cytosol, extracellular, mitochondrion, plastid	6.94	41.57
HORVU3Hr1G025640.2	Barley	plastid	29.64	30.15

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	UniProt:A0A287KQS6	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Arm_3	InterPro:Armadillo	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006606
GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0061608	EnsemblPlantsGene:HORVU3Hr1G034750
EnsemblPlants:HORVU3Hr1G034750.5	InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB
InterPro:Importin-a_IBB_sf	InterPro:Importing_su_alpha	PFAM:PF00514	PFAM:PF01749	PFAM:PF16186	PIRSF:PIRSF005673
PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF35	SMART:SM00185	SUPFAM:SSF48371
UniParc:UPI000B46601E	SEG:seg	:	:	:	:

Description

Importin subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A287KQS6]

Coordinates

chrchr3H:+:190499143..190502980

Molecular Weight (calculated)

58477.9 Da

IEP (calculated)

4.782

GRAVY (calculated)

-0.227

Length

533 amino acids

Sequence
(BLAST)

001: MSVRPSERAD ARRNRYKVTV DADEGRRRRE DNMVEIRKNR REESLLKKRR EGLQAQAPIP AAGVEKKEMF ACARLNLESL PAMVGGVYSE DNNLQLEATT
101: QFRKLLSIER SPPIEEVIQS GVVPRFVQFL TREDFPQLQF EAAWALTNIA SGTSENTKVV IDHGAVPIFV KLLASGSDDV REQAVWALGN VAGDSPKCRD
201: LVLANGALMP LLAQLNEHAK LSMLRNATWT LSNFCRGKPQ PAFDQTKPAL PALARLIHSN DEEVLTDACW ALSYLSDGTN DKIQSVIDAG VCPRLVELLL
301: HPSPSVLIPA LRTVGNIVTG DDSQTQCIID HQALGCLLSL LTENHKKSIK KEACWTVSNI TAGNKDQIQA VITAGIIFPL VHLLQTAEFD IKKEAAWAIS
401: NATSGGSHDQ IKYLVSEGCI KPLCDLLLCP DPRIVTVCLE GLENILKVGE TDKNLGASGE GNVYAQMIDE AEGLEKIENL QSHDNNEIYE KAVKILEAYW
501: MEEEDDAMGT TMEAPTGVAF DFGQGGNPDL NLG

Best Arabidopsis Sequence Match ( AT4G16143.1 )
(BLAST)

001: MSLRPNAKTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKSK REESLQKKRR EGLQANQLPQ FAPSPVPASS TVEKKLESLP AMVGGVWSDD RSLQLEATTQ
101: FRKLLSIERS PPIEEVIDAG VVPRFVEFLT REDYPQLQFE AAWALTNIAS GTSENTKVVI EHGAVPIFVQ LLASQSDDVR EQAVWALGNV AGDSPRCRDL
201: VLGQGALIPL LSQLNEHAKL SMLRNATWTL SNFCRGKPQP PFDQVRPALP ALERLIHSTD EEVLTDACWA LSYLSDGTND KIQSVIEAGV VPRLVELLQH
301: QSPSVLIPAL RSIGNIVTGD DLQTQCVISH GALLSLLSLL THNHKKSIKK EACWTISNIT AGNRDQIQAV CEAGLICPLV NLLQNAEFDI KKEAAWAISN
401: ATSGGSPDQI KYMVEQGVVK PLCDLLVCPD PRIITVCLEG LENILKVGEA EKVTGNTGDV NFYAQLIDDA EGLEKIENLQ SHDNSEIYEK AVKILETYWL
501: EEEDETLPPG DPSAQGFQFG GGNDAAVPPG GFNFQ

Arabidopsis Description

IMPA2Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:F4JL11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.