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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • cytosol 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G152900.1 Wheat plastid 98.47 98.47
TraesCS3D01G135500.2 Wheat plastid 99.24 92.53
TraesCS3A01G309900.2 Wheat plastid 99.05 92.35
Zm00001d008640_P002 Maize plastid 85.88 85.55
Os01t0158000-01 Rice cytosol 82.82 82.2
EES02429 Sorghum plastid 87.02 80.71
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, nucleus, plastid 69.66 70.06
VIT_08s0040g02290.t01 Wine grape cytosol 66.22 67.12
KRH19830 Soybean cytosol, plastid 65.65 66.54
CDY55698 Canola cytosol, plastid 62.6 63.08
CDY04878 Canola plastid 62.21 62.57
AT5G03070.1 Thale cress cytosol, plastid 61.83 62.43
PGSC0003DMT400027134 Potato cytosol 61.83 62.31
Solyc10g084270.1.1 Tomato cytosol 60.88 61.35
KRH32422 Soybean plastid 23.47 61.19
CDX70330 Canola cytosol, extracellular 30.15 60.54
Bra028852.1-P Field mustard cytosol 60.5 60.15
CDY10407 Canola cytosol 55.92 59.31
Bra009550.1-P Field mustard plastid 32.82 58.9
HORVU3Hr1G034750.5 Barley cytosol 30.15 29.64
HORVU1Hr1G022750.2 Barley plasma membrane 29.01 26.95
HORVU2Hr1G016300.1 Barley cytosol 20.8 23.9
Protein Annotations
Gene3D:1.25.10.10MapMan:23.5.1.3UniProt:A0A287KH11InterPro:ARM-likeInterPro:ARM-type_foldInterPro:Armadillo
GO:GO:0003674GO:GO:0005215GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0006606GO:GO:0006810
GO:GO:0008150GO:GO:0015031GO:GO:0061608EnsemblPlantsGene:HORVU3Hr1G025640EnsemblPlants:HORVU3Hr1G025640.2InterPro:IPR000225
InterPro:IPR011989InterPro:Importing_su_alphaPFAM:PF00514PIRSF:PIRSF005673PANTHER:PTHR23316PANTHER:PTHR23316:SF1
SMART:SM00185SUPFAM:SSF48371UniParc:UPI000B46370ESEG:seg::
Description
Importin subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A287KH11]
Coordinates
chrchr3H:-:101541794..101547398
Molecular Weight (calculated)
56332.9 Da
IEP (calculated)
5.943
GRAVY (calculated)
0.017
Length
524 amino acids
Sequence
(BLAST)
001: MADGNAPGSP ASSLQSHRYA IKSSVHNTAA SRRREQAIAI GKERREALMR AKRVCRAPLS GNDEATIEDG DMVIDEKADI ETRTAQAVEE LKSALSSQGK
101: GAQKKKIEAL RAVRRVLSQS VVPPIQVAIK AGAVPLLVQY LSFGSSDEQL LEAAWCLTNI AAGEPEETKS VLPALPLLVA HLGEKSSTLV AEQCAWAIGN
201: VAGEGADLRS TLIAQGALWP LARLMLSSKG STARTAAWAL SNLIKGPDPK AAYELINIDG VLNAIIRNLE KADEELATEV AWVVVYLSAL SEKAISLIVR
301: SHVPQLLIGR LLASENLQLL IPVLRGLGNL VAGDEYMVNS ILIVGNSITD QALSSLIKCL KSDNRVLRKE ASWALSNIAA GSFEHKKLIF TSEATPSLIH
401: LLTSAQFDIR KEAAYTLGNL CVVPAGSTEP PNIITEHLVS IINGGALPGF INLVRSADIE SARLGLQFLE LVMRGYPNGQ GPQLVERGDG IEAMERFQFH
501: ENEAMRNMAN GLVDKYFGED YGLE
Best Arabidopsis Sequence Match ( AT5G03070.1 )
(BLAST)
001: MADDGSASNR RDPIKSSVGN VAGQRRRKQA VTVAKERREL LVRAKRLCRV GTNGDVEDAL VENEMMVDEE QPILEAQASK SVEELKSAVQ YQGKGAMQKR
101: VTALRELRRL LSKSEFPPVE AALRAGAIPL LVQCLSFGSP DEQLLESAWC LTNIAAGKPE ETKALLPALP LLIAHLGEKS SAPVAEQCAW AIGNVAGEGE
201: DLRNVLLSQG ALPPLARMIF PDKGSTVRTA AWALSNLIKG PESKAAAQLV KIDGILDAIL RHLKKTDEET ATEIAWIIVY LSALSDIATS MLLKGGILQL
301: LIDRLATSSS LQLLIPVLRS LGNFVAVDPK AVLTILIREQ NTEESIIGVL AKCLRSEHRV LKKEAAWVLS NIAAGSIEHK RMIHSTEVMP LLLRILSTSP
401: FDIRKEVAYV LGNLCVESAE GDRKPRIIQE HLVSIVSGGC LRGFIELVRS PDIEAARLGL QFIELVLRGM PNGEGPKLVE GEDGIDAMER FQFHENEELR
501: VMANSLVDKY FGEDYGIDE
Arabidopsis Description
IMPA9Importin subunit alpha-9 [Source:UniProtKB/Swiss-Prot;Acc:F4KF65]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.