CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70330	Canola	cytosol, extracellular	48.99	92.72
CDY04878	Canola	plastid	87.25	82.73
CDY55698	Canola	cytosol, plastid	87.04	82.69
AT5G03070.1	Thale cress	cytosol, plastid	84.82	80.73
VIT_08s0040g02290.t01	Wine grape	cytosol	72.06	68.86
KRH19830	Soybean	cytosol, plastid	68.83	65.76
PGSC0003DMT400027134	Potato	cytosol	65.79	62.5
Solyc10g084270.1.1	Tomato	cytosol	64.78	61.54
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	62.96	59.69
Zm00001d008640_P002	Maize	plastid	60.73	57.03
TraesCS3B01G152900.1	Wheat	plastid	59.51	56.11
HORVU3Hr1G025640.2	Barley	plastid	59.31	55.92
Os01t0158000-01	Rice	cytosol	58.1	54.36
TraesCS3D01G135500.2	Wheat	plastid	59.72	52.49
EES02429	Sorghum	plastid	59.92	52.39
TraesCS3A01G309900.2	Wheat	plastid	59.51	52.31
KRH32422	Soybean	plastid	20.85	51.24
CDY32215	Canola	cytosol	28.34	26.42
CDY34430	Canola	cytosol	28.14	26.23
CDX93514	Canola	cytosol	28.74	26.2
CDY09716	Canola	cytosol	28.34	26.17
CDY31102	Canola	plasma membrane	28.54	26.01
CDX94988	Canola	cytosol	28.34	25.93
CDY52043	Canola	cytosol	27.73	25.66
CDY22779	Canola	cytosol	27.73	25.66
CDY32165	Canola	cytosol	28.14	25.65
CDX90544	Canola	cytosol	27.73	25.37
CDX89948	Canola	cytosol	26.52	25.14
CDY01921	Canola	cytosol	26.52	24.67
CDX97257	Canola	cytosol	26.52	24.67
CDX90948	Canola	cytosol	25.51	24.32
CDY64806	Canola	cytosol	25.3	24.13
CDY33917	Canola	cytosol	23.68	21.99
CDY05638	Canola	cytosol	23.68	21.95
CDY05194	Canola	cytosol	23.48	21.6
CDY27746	Canola	cytosol	23.68	21.59
CDY32170	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	7.29	19.89
CDY15260	Canola	cytosol	27.33	17.42

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	GO:A0A078FBM6	UniProt:A0A078FBM6	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	EnsemblPlants:CDY10407	ProteinID:CDY10407	ProteinID:CDY10407.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031
GO:GO:0061608	EnsemblPlantsGene:GSBRNA2T00032321001	InterPro:IPR000225	InterPro:IPR011989	InterPro:Importing_su_alpha	PFAM:PF00514
PIRSF:PIRSF005673	PANTHER:PTHR23316	PANTHER:PTHR23316:SF1	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0004EF406E
SEG:seg	:	:	:	:	:

Description

BnaCnng03080DImportin subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A078FBM6]

Coordinates

chrLK032003:+:314483..317345

Molecular Weight (calculated)

53562.2 Da

IEP (calculated)

4.823

GRAVY (calculated)

0.121

Length

494 amino acids

Sequence
(BLAST)

001: MDGGGLIFGL MGGRQQAVTA GTIGDDEEHP HVENEMMIDE EQPVLEAQTS KAVEELKSTV QYHIYLSSFF MQKRVTALRE LRRLLSKSEF PPIEAALSAG
101: AVPLLVQCLS FGSPDEQLLE SAWCLTNIAA GKPEETKALL PALPLLIAHL GGLKKLSAEQ CSWAIGNVAG EGEDLRNVLL SQGALPPLAR MIFPDKGSTV
201: RTAAWALSNL IKGPESKAAA QLVRVDGMVD AILRHLKKSD EEIATEIAWI VVYLSALSDI ATSMLLKGGI LQLLVERLAT SNSLQLLIPV LRSLGNFVSV
301: DPKAMLAILI GGKNTEDYVI GVLAKCLRSE HRVLKKEAAW VLSNIAAGSI EHKRMIHSTE AMPLLIGLLS TSPSPFDIRK EVAYVLGNVC VESAEGDTKP
401: KIIQEQLVSI VSGGCLPGFI NLVRSPDIEA ARLGLQFIEL VLRGMPNVEG SKIVEGEDGI DAMERFQFHE NEELRVIANS LVDKYFGEDY GINE

Best Arabidopsis Sequence Match ( AT5G03070.1 )
(BLAST)

001: MADDGSASNR RDPIKSSVGN VAGQRRRKQA VTVAKERREL LVRAKRLCRV GTNGDVEDAL VENEMMVDEE QPILEAQASK SVEELKSAVQ YQGKGAMQKR
101: VTALRELRRL LSKSEFPPVE AALRAGAIPL LVQCLSFGSP DEQLLESAWC LTNIAAGKPE ETKALLPALP LLIAHLGEKS SAPVAEQCAW AIGNVAGEGE
201: DLRNVLLSQG ALPPLARMIF PDKGSTVRTA AWALSNLIKG PESKAAAQLV KIDGILDAIL RHLKKTDEET ATEIAWIIVY LSALSDIATS MLLKGGILQL
301: LIDRLATSSS LQLLIPVLRS LGNFVAVDPK AVLTILIREQ NTEESIIGVL AKCLRSEHRV LKKEAAWVLS NIAAGSIEHK RMIHSTEVMP LLLRILSTSP
401: FDIRKEVAYV LGNLCVESAE GDRKPRIIQE HLVSIVSGGC LRGFIELVRS PDIEAARLGL QFIELVLRGM PNGEGPKLVE GEDGIDAMER FQFHENEELR
501: VMANSLVDKY FGEDYGIDE

Arabidopsis Description

IMPA9Importin subunit alpha-9 [Source:UniProtKB/Swiss-Prot;Acc:F4KF65]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.