Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020649.1-P | Field mustard | cytosol | 95.3 | 95.3 |
| CDY05638 | Canola | cytosol | 91.35 | 91.18 |
| CDY22779 | Canola | cytosol | 65.23 | 64.98 |
| CDY52043 | Canola | cytosol | 65.23 | 64.98 |
| CDY32215 | Canola | cytosol | 64.1 | 64.34 |
| CDY34430 | Canola | cytosol | 64.1 | 64.34 |
| CDY09716 | Canola | cytosol | 64.66 | 64.3 |
| CDX90544 | Canola | cytosol | 64.66 | 63.7 |
| CDY01921 | Canola | cytosol | 58.65 | 58.76 |
| CDX97257 | Canola | cytosol | 58.46 | 58.57 |
| CDX94988 | Canola | cytosol | 59.4 | 58.52 |
| CDY31102 | Canola | plasma membrane | 59.59 | 58.49 |
| CDX93514 | Canola | cytosol | 59.4 | 58.3 |
| CDY32165 | Canola | cytosol | 59.21 | 58.12 |
| CDY64806 | Canola | cytosol | 55.64 | 57.14 |
| CDX90948 | Canola | cytosol | 55.08 | 56.56 |
| CDX89948 | Canola | cytosol | 54.89 | 56.05 |
| AT1G32880.1 | Thale cress | cytosol | 18.98 | 55.19 |
| AT5G52000.1 | Thale cress | cytosol | 45.68 | 55.1 |
| VIT_15s0021g00390.t01 | Wine grape | cytosol | 5.45 | 53.7 |
| AT5G49305.2 | Thale cress | cytosol | 34.96 | 48.44 |
| CDY05194 | Canola | cytosol | 48.87 | 48.42 |
| CDY27746 | Canola | cytosol | 48.87 | 47.97 |
| CDY32170 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 14.1 | 41.44 |
| CDY15260 | Canola | cytosol | 56.77 | 38.97 |
| CDY55698 | Canola | cytosol, plastid | 25.0 | 25.58 |
| CDY04878 | Canola | plastid | 24.81 | 25.34 |
| CDY10407 | Canola | cytosol | 21.99 | 23.68 |
| CDX70330 | Canola | cytosol, extracellular | 10.53 | 21.46 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.3 | GO:A0A078H8P4 | UniProt:A0A078H8P4 | InterPro:ARM-like | InterPro:ARM-type_fold |
| InterPro:Arm_3 | InterPro:Armadillo | EnsemblPlants:CDY33917 | ProteinID:CDY33917 | ProteinID:CDY33917.1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006606 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008565 |
| GO:GO:0015031 | GO:GO:0061608 | EnsemblPlantsGene:GSBRNA2T00055425001 | InterPro:IPR000225 | InterPro:IPR002652 | InterPro:IPR011989 |
| InterPro:Importin-a_IBB | InterPro:Importing_su_alpha | PFAM:PF00514 | PFAM:PF01749 | PFAM:PF16186 | PIRSF:PIRSF005673 |
| PFscan:PS50176 | PFscan:PS51214 | PANTHER:PTHR23316 | PANTHER:PTHR23316:SF22 | SMART:SM00185 | SUPFAM:SSF48371 |
| UniParc:UPI0004EE6FC9 | SEG:seg | : | : | : | : |
Description
BnaA02g30700DImportin subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A078H8P4]
Coordinates
chrLK032324:+:259868..264660
Molecular Weight (calculated)
59172.9 Da
IEP (calculated)
5.206
GRAVY (calculated)
-0.258
Length
532 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLRPNEKTH VRRNSHKVAV DTEQSRRRRE SNLVEIRKSR REEILKKKRL HVTQEAPQDP PLPSPDSIDK MVRNLIGLVA GVLSDDRLLQ LESLNQFRLI
101: LSTSKNPPIG MVIESGVVRR FVEILNKDDS PWLQLEAAWI LTNIASGTRK HTEVVIDHGA VPIFIKLLAS PHEDVREQAV WALGNVAGDS PQCRDYVLEC
201: GAMMPLLVQL NEHSTLSMIG NATWTLSNFC RGKPKPAFEQ VSPALPVLER LVRSNDEDVL ADACWSLSFM SDGGEEEIQS VIEAGVAPRL VELLLHPCPS
301: VVSPALRTIG NIISGNTQQT QCVINCGALP ILSKLLTQYY TKSIKRDVCW TIANITAGNK EHIQLIIDAT MIPSLVHLAQ YAEFDIKKEA LCAISNATRG
401: GSHEQIKYLV EQSCIKPLCD ILVCQDPSVI SVCLDGLENI LKAGEVEKST GGQRNYSQLI EDAEGLEKIE KLQSNDNNEI YEKAVKILET YWVEEDDEEA
501: QQEDDGGDDC SHLGIQFGRK RVQVPHGGFN FG
101: LSTSKNPPIG MVIESGVVRR FVEILNKDDS PWLQLEAAWI LTNIASGTRK HTEVVIDHGA VPIFIKLLAS PHEDVREQAV WALGNVAGDS PQCRDYVLEC
201: GAMMPLLVQL NEHSTLSMIG NATWTLSNFC RGKPKPAFEQ VSPALPVLER LVRSNDEDVL ADACWSLSFM SDGGEEEIQS VIEAGVAPRL VELLLHPCPS
301: VVSPALRTIG NIISGNTQQT QCVINCGALP ILSKLLTQYY TKSIKRDVCW TIANITAGNK EHIQLIIDAT MIPSLVHLAQ YAEFDIKKEA LCAISNATRG
401: GSHEQIKYLV EQSCIKPLCD ILVCQDPSVI SVCLDGLENI LKAGEVEKST GGQRNYSQLI EDAEGLEKIE KLQSNDNNEI YEKAVKILET YWVEEDDEEA
501: QQEDDGGDDC SHLGIQFGRK RVQVPHGGFN FG
001: MSLRPNAKTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKSK REESLMKKRR EGMQALQGFP SASAASVDKK LDSLKDMVAG VWSDDPALQL ESTTQFRKLL
101: SIERSPPIEE VISAGVVPRF VEFLKKEDYP AIQFEAAWAL TNIASGTSDH TKVVIDHNAV PIFVQLLASP SDDVREQAVW ALGNVAGDSP RCRDLVLGCG
201: ALLPLLNQLN EHAKLSMLRN ATWTLSNFCR GKPQPHFDQV KPALPALERL IHSDDEEVLT DACWALSYLS DGTNDKIQTV IQAGVVPKLV ELLLHHSPSV
301: LIPALRTVGN IVTGDDIQTQ CVINSGALPC LANLLTQNHK KSIKKEACWT ISNITAGNKD QIQTVVEANL ISPLVSLLQN AEFDIKKEAA WAISNATSGG
401: SHDQIKYLVE QGCIKPLCDL LVCPDPRIIT VCLEGLENIL KVGEAEKNLG HTGDMNYYAQ LIDDAEGLEK IENLQSHDNN EIYEKAVKIL ETYWLEEEDD
501: ETQQPPGVDG SQAGFQFGGN QAPVPSGGFN FS
101: SIERSPPIEE VISAGVVPRF VEFLKKEDYP AIQFEAAWAL TNIASGTSDH TKVVIDHNAV PIFVQLLASP SDDVREQAVW ALGNVAGDSP RCRDLVLGCG
201: ALLPLLNQLN EHAKLSMLRN ATWTLSNFCR GKPQPHFDQV KPALPALERL IHSDDEEVLT DACWALSYLS DGTNDKIQTV IQAGVVPKLV ELLLHHSPSV
301: LIPALRTVGN IVTGDDIQTQ CVINSGALPC LANLLTQNHK KSIKKEACWT ISNITAGNKD QIQTVVEANL ISPLVSLLQN AEFDIKKEAA WAISNATSGG
401: SHDQIKYLVE QGCIKPLCDL LVCPDPRIIT VCLEGLENIL KVGEAEKNLG HTGDMNYYAQ LIDDAEGLEK IENLQSHDNN EIYEKAVKIL ETYWLEEEDD
501: ETQQPPGVDG SQAGFQFGGN QAPVPSGGFN FS
Arabidopsis Description
IMPA1Importin subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A178VHS3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.