Factsheet for Bra020649.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33917	Canola	cytosol	95.3	95.3
Bra012741.1-P	Field mustard	cytosol	44.74	66.67
Bra038043.1-P	Field mustard	cytosol	65.79	65.54
Bra033534.1-P	Field mustard	cytosol	64.85	65.09
Bra008559.1-P	Field mustard	cytosol	58.46	58.57
Bra018570.1-P	Field mustard	cytosol	59.59	58.49
Bra000891.1-P	Field mustard	cytosol	55.45	56.95
Bra033342.1-P	Field mustard	cytosol	55.64	56.81
Bra012740.1-P	Field mustard	cytosol	16.54	55.7
AT1G32880.1	Thale cress	cytosol	18.8	54.64
AT5G52000.1	Thale cress	cytosol	44.92	54.2
VIT_15s0021g00390.t01	Wine grape	cytosol	5.45	53.7
AT5G49305.2	Thale cress	cytosol	35.15	48.7
Bra039416.1-P	Field mustard	cytosol	44.92	47.9
Bra030765.1-P	Field mustard	cytosol	59.77	42.18
Bra030771.1-P	Field mustard	cytosol	30.64	37.47
Bra028852.1-P	Field mustard	cytosol	24.44	24.67
Bra009550.1-P	Field mustard	plastid	12.41	22.6

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.3	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Arm_3	InterPro:Armadillo
EnsemblPlantsGene:Bra020649	EnsemblPlants:Bra020649.1	EnsemblPlants:Bra020649.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0061608
InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:Importin-a_IBB	InterPro:Importing_su_alpha	UniProt:M4DVV5
PFAM:PF00514	PFAM:PF01749	PFAM:PF16186	PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214
PANTHER:PTHR23316	PANTHER:PTHR23316:SF22	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0002546511	SEG:seg

Description

AT3G06720 (E=1e-200) AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1, IMPA1 | IMPA-1 (IMPORTIN ALPHA ISOFORM 1); binding / protein transporter

Coordinates

chrA02:-:23949790..23951807

Molecular Weight (calculated)

59044.8 Da

IEP (calculated)

5.524

GRAVY (calculated)

-0.232

Length

532 amino acids

Sequence
(BLAST)

001: MSLRPNEKTH VRRNSHKVAV DAEQSRRRRE SNLVEIRKSR REEILKKKRL HVTQEAPQGS PLPSSDSIDK MLRNLIGLVA GVSSDDPLLQ LESLKQFRLI
101: LSTSKNPPIG VVIESGVVRR FVEILNKDDS PWLQLEAAWI LTNIASGTRK HTEVVIDHGA VPIFIKLLAS PHEDVREQAV WALGNVAGDS PQCRDYVLEC
201: GAMMPLLAQL NKHSTLSMIT NATWTLSNFC RGKPKPAFEQ VSPALPVLER LIRSNDEEVL ADACWSLSFM SDGGEEEIQS VIEAGVVPRL VELLLHPCPS
301: VVSPALRSIG NIVSGNTQQT QCVINCGALP ILSKLLTQYY KKSIKRDVCW TIANITAGIK EHIQLVIDAT MIPSLVHLAQ YAEFDIKKEA LCAISNATRG
401: GSHEQVKYLV EQSCIKPLCD ILVCQDPSVI SVCLDGLENI LKVGEVENST GGQRNYSQLI EDAEGIEKIE KLQSNDNNEI YEKAVKILET YWVEEDDEEA
501: QQEDDGGDDC SHLGIQFGRK RIQVPHGGFN FG

Best Arabidopsis Sequence Match ( AT5G49310.1 )
(BLAST)

001: MSLRPSTKTE IRRIRYKVSV DAEEGRRRRE DFLVEIRKSK RNENLMKKRR VKVLPPDYKL ISNDPFESLL EIANMITGVF SDDPSLQLEY TTRFRVVLSF
101: DRSPPTDNVI KSGVVPRFVE FLKKDDNPKL QFEAAWALTN IASGASEHTK VVIDHGVVPL FVQLLASPDD DVREQAIWGL GNVAGDSIQC RDFVLNSGAF
201: IPLLHQLNNH ATLSILRNAT WTLSNFFRGK PSPPFDLVKH VLPVLKRLVY SDDEQVLIDA CWALSNLSDA SNENIQSVIE AGVVPRLVEL LQHASPVVLV
301: PALRCIGNIV SGNSQQTHCV INCGVLPVLA DLLTQNHMRG IRREACWTIS NITAGLEEQI QSVIDANLIP SLVNLAQHAE FDIKKEAIWA ISNASVGGSP
401: NQIKYLVEQN CIKALCDILV CPDLRIILVS LGGLEMILIA GEVDKNLRDV NCYSQMIEDA EGLEKIENLQ HHGNNEIYEK AVKILQTYGL VEEDGRLVEE
501: EDEGGDGCSH PEFQFDFSR

Arabidopsis Description

IMPA5Importin subunit alpha-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ09]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.