Factsheet for Bra039416.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27746	Canola	cytosol	100.0	92.07
AT3G05720.1	Thale cress	cytosol	86.57	81.82
Bra038043.1-P	Field mustard	cytosol	57.92	54.12
Bra033534.1-P	Field mustard	cytosol	57.31	53.96
Bra012741.1-P	Field mustard	cytosol	38.08	53.22
Bra012740.1-P	Field mustard	cytosol	16.23	51.27
Bra018570.1-P	Field mustard	cytosol	52.91	48.71
Bra008559.1-P	Field mustard	cytosol	51.1	48.02
Bra000891.1-P	Field mustard	cytosol	49.7	47.88
Bra033342.1-P	Field mustard	cytosol	47.49	45.49
Bra020649.1-P	Field mustard	cytosol	47.9	44.92
VIT_15s0021g00390.t01	Wine grape	cytosol	4.81	44.44
Bra030771.1-P	Field mustard	cytosol	32.06	36.78
Bra030765.1-P	Field mustard	cytosol	53.51	35.41
Bra028852.1-P	Field mustard	cytosol	24.25	22.96
Bra009550.1-P	Field mustard	plastid	11.22	19.18

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Arm_3
InterPro:Armadillo	EnsemblPlantsGene:Bra039416	EnsemblPlants:Bra039416.1	EnsemblPlants:Bra039416.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031
GO:GO:0061608	InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB
InterPro:Importin-a_IBB_sf	InterPro:Importing_su_alpha	UniProt:M4FE95	PFAM:PF00514	PFAM:PF01749	PFAM:PF16186
PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF22	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI000254819F	SEG:seg	:	:	:

Description

AT3G05720 (E=1e-182) IMPA-7 | IMPA-7 (IMPORTIN ALPHA ISOFORM 7); binding / protein transporter

Coordinates

chrA05:+:23257155..23260423

Molecular Weight (calculated)

55080.7 Da

IEP (calculated)

4.673

GRAVY (calculated)

-0.152

Length

499 amino acids

Sequence
(BLAST)

001: MKGGGTTSWT TTSVRRSGYK AVVDGVGGRR RREEDMVEIR KAKREESLLK KRREALPLPH SPPPSAAVSL DQNLISRIWS DKKELLIEAT TQIRTLLCGE
101: MFNVHVEEVI QAGLVPRFVE FLTWDDFPQL QFEAAWALTN IASGTSENTE VVIDHGAVAI LVRLLSSPYD GVREQVVWAL GNISGDSPRC RNIVLGHGAL
201: PSLLLQLNNG AKLSMLVNAA WTLSNLCRGK PQPPYDQVSA ALPALAQLIR LDDKELLAYT CWALVYLSDG SNEKIQAVIE ANVCGRLIGL SVHRSPSVAT
301: PALRTIGIVV TGNDSQTQYI IDLQALPCLL NLLRGPYNKT IRKEACWVVS NITAGCQSQI QAVYDADVCP ALVNLLRNSE FDVKYEAAWA ICNAIAGGSY
401: KQILHADGNQ CTETNVNPHA QLIEDAEGLE KIESLQSHEN SDIYEMAVKI LETYWLEEEE EDEVEEEDKG RQDIVYFPVD NFANMPTPSC TLGEMYCGP

Best Arabidopsis Sequence Match ( AT3G05720.2 )
(BLAST)

001: MKGGETMSVR RSGYKAVVDG VGGRRRREDD MVEIRKAKRE ESLLKKRREA LPHSPSADSL DQKLISCIWS DERDLLIEAT TQIRTLLCGE MFNVRVEEVI
101: QAGLVPRFVE FLTWDDSPQL QFEAAWALTN IASGTSENTE VVIDHGAVAI LVRLLNSPYD VVREQVVWAL GNISGDSPRC RDIVLGHAAL PSLLLQLNHG
201: AKLSMLVNAA WTLSNLCRGK PQPPFDQVSA ALPALAQLIR LDDKELLAYT CWALVYLSDG SNEKIQAVIE ANVCARLIGL SIHRSPSVIT PALRTIGNIV
301: TGNDSQTQHI IDLQALPCLV NLLRGSYNKT IRKEACWTVS NITAGCQSQI QAVFDADICP ALVNLLQNSE GDVKKEAAWA ICNAIAGGSY KQIMFLVKQE
401: CIKPLCDLLT CSDTQLVMVC LEALKKILKV GEVFSSRHAE GIYQCPQTNV NPHAQLIEEA EGLEKIEGLQ SHENNDIYET AVKILETYWM EEEEEEDQEQ
501: QDMIYFPVDN FANMPTSSGT LSEMHCGP

Arabidopsis Description

IMPA7Importin subunit alpha-7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9X7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.