Factsheet for Bra033534.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32215	Canola	cytosol	100.0	100.0
Bra012741.1-P	Field mustard	cytosol	62.83	93.28
Bra038043.1-P	Field mustard	cytosol	93.77	93.07
AT4G16143.2	Thale cress	cytosol	93.77	92.9
Bra012740.1-P	Field mustard	cytosol	26.6	89.24
VIT_05s0077g01430.t01	Wine grape	cytosol	85.28	85.44
KRH37030	Soybean	endoplasmic reticulum, mitochondrion	84.53	84.37
KRH11998	Soybean	endoplasmic reticulum	84.53	84.37
KRH50772	Soybean	cytosol, endoplasmic reticulum	71.89	84.11
KRH02317	Soybean	cytosol	83.96	83.96
Solyc01g060470.2.1	Tomato	extracellular	83.58	83.58
PGSC0003DMT400038784	Potato	cytosol	83.4	83.55
Bra018570.1-P	Field mustard	cytosol	73.58	71.96
Bra008559.1-P	Field mustard	cytosol	69.81	69.68
Bra033342.1-P	Field mustard	cytosol	66.6	67.75
Zm00001d042015_P001	Maize	cytosol	20.94	66.87
Bra000891.1-P	Field mustard	cytosol	65.09	66.6
Bra020649.1-P	Field mustard	cytosol	65.09	64.85
Bra039416.1-P	Field mustard	cytosol	53.96	57.31
Zm00001d040153_P004	Maize	cytosol	19.62	56.83
Bra030765.1-P	Field mustard	cytosol	74.15	52.12
Bra030771.1-P	Field mustard	cytosol	36.42	44.37
Zm00001d024033_P002	Maize	plastid	13.96	34.1
Bra028852.1-P	Field mustard	cytosol	28.11	28.27
Bra009550.1-P	Field mustard	plastid	14.15	25.68

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Arm_3
InterPro:Armadillo	EnsemblPlantsGene:Bra033534	EnsemblPlants:Bra033534.1	EnsemblPlants:Bra033534.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031
GO:GO:0061608	InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB
InterPro:Importin-a_IBB_sf	InterPro:Importing_su_alpha	UniProt:M4EXJ7	PFAM:PF00514	PFAM:PF01749	PFAM:PF16186
PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF22	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI0001D65266	SEG:seg	:	:	:

Description

AT4G16143 (E=8e-283) IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2); binding / protein transporter

Coordinates

chrA01:+:11293574..11296362

Molecular Weight (calculated)

58369.5 Da

IEP (calculated)

4.742

GRAVY (calculated)

-0.269

Length

530 amino acids

Sequence
(BLAST)

001: MSLRPNARTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKTK REESLLKKRR EGLQATQLPQ VTSAASSVEK KLESLPSMVG GVWSDDRSLQ LEATTQFRKL
101: LSIERSPPIE EVIDAGVVPR FVEFLMREDY PQLQFEAAWA LTNIASGTSE HTKVVIQHDA VPIFVQLLAS QSDDVREQAV WALGNVAGDS PQCRDLVLSK
201: GALLPLLSQL NEHAKLSMLR NATWTLSNFC RGKPQPPFDQ VRPALPALER LIHSTDEEVL TDACWALSYL SDGTNDKIQS VIEAGVVPRL VELLQHPSPS
301: VLIPALRSIG NIVTGDDAQT QCVISHGALL CLLSLLTQNH KKSIKKEACW TISNITAGNR DQIQAVCEAG LIGPLINLLQ NAEFDIKKEA AWAVSNATSG
401: GSADQIKYMV DQGVVKPLCD LLVCPDPRII TVCLEGLENI LKVGEAEKVT GNTGDANYYA QLIDDAEGLE KIENLQSHDN SEIYEKAVKI LETYWLEEED
501: ETLPPGDESA QGFQFGGSDA AAPPGGFNFK

Best Arabidopsis Sequence Match ( AT4G16143.1 )
(BLAST)

001: MSLRPNAKTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKSK REESLQKKRR EGLQANQLPQ FAPSPVPASS TVEKKLESLP AMVGGVWSDD RSLQLEATTQ
101: FRKLLSIERS PPIEEVIDAG VVPRFVEFLT REDYPQLQFE AAWALTNIAS GTSENTKVVI EHGAVPIFVQ LLASQSDDVR EQAVWALGNV AGDSPRCRDL
201: VLGQGALIPL LSQLNEHAKL SMLRNATWTL SNFCRGKPQP PFDQVRPALP ALERLIHSTD EEVLTDACWA LSYLSDGTND KIQSVIEAGV VPRLVELLQH
301: QSPSVLIPAL RSIGNIVTGD DLQTQCVISH GALLSLLSLL THNHKKSIKK EACWTISNIT AGNRDQIQAV CEAGLICPLV NLLQNAEFDI KKEAAWAISN
401: ATSGGSPDQI KYMVEQGVVK PLCDLLVCPD PRIITVCLEG LENILKVGEA EKVTGNTGDV NFYAQLIDDA EGLEKIENLQ SHDNSEIYEK AVKILETYWL
501: EEEDETLPPG DPSAQGFQFG GGNDAAVPPG GFNFQ

Arabidopsis Description

IMPA2Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:F4JL11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.