Factsheet for Zm00001d042015_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024033_P002	Maize	plastid	40.36	30.88
Zm00001d040153_P004	Maize	cytosol	28.92	26.23
KRH50772	Soybean	cytosol, endoplasmic reticulum	68.07	24.94
CDY32170	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.51	24.31
Bra012740.1-P	Field mustard	cytosol	22.89	24.05
Zm00001d040274_P001	Maize	cytosol	74.7	23.44
Zm00001d008345_P003	Maize	cytosol	73.49	23.02
VIT_05s0077g01430.t01	Wine grape	cytosol	69.88	21.93
PGSC0003DMT400038784	Potato	cytosol	68.67	21.55
Solyc01g060470.2.1	Tomato	extracellular	68.67	21.51
KRH02317	Soybean	cytosol	67.47	21.13
AT4G16143.2	Thale cress	cytosol	68.07	21.12
KRH11998	Soybean	endoplasmic reticulum	67.47	21.09
KRH37030	Soybean	endoplasmic reticulum, mitochondrion	67.47	21.09
Zm00001d037606_P001	Maize	cytosol	66.87	21.02
CDY34430	Canola	cytosol	66.87	20.94
Bra033534.1-P	Field mustard	cytosol	66.87	20.94
CDY32215	Canola	cytosol	66.87	20.94
AT3G06720.2	Thale cress	cytosol	65.66	20.49
CDY09716	Canola	cytosol	65.66	20.37
CDX90544	Canola	cytosol	66.27	20.37
CDY22779	Canola	cytosol	63.86	19.85
Bra038043.1-P	Field mustard	cytosol	63.86	19.85
CDY52043	Canola	cytosol	63.86	19.85
Zm00001d009850_P002	Maize	cytosol	65.06	18.75
AT5G49310.1	Thale cress	cytosol	57.83	18.5
Bra012741.1-P	Field mustard	cytosol	34.34	15.97
Zm00001d022536_P008	Maize	cytosol	38.55	11.27
Zm00001d008640_P002	Maize	plastid	24.1	7.6

Protein Annotations

EnsemblPlants:Zm00001d042015_P001	EnsemblPlants:Zm00001d042015_T001	EnsemblPlantsGene:Zm00001d042015	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989
PANTHER:PTHR23316	PANTHER:PTHR23316:SF22	PFAM:PF00514	PFscan:PS50176	ProteinID:ONM34305.1	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI0008445E6E	UniProt:A0A1D6N0J1	MapMan:35.1	:	:

Description

Importin subunit alpha-6

Coordinates

chr3:+:147407812..147408822

Molecular Weight (calculated)

18219.8 Da

IEP (calculated)

4.617

GRAVY (calculated)

0.145

Length

166 amino acids

Sequence
(BLAST)

001: MIAATLEIIR AAPIEGVIKL GVVPRFVQFL TREDLSQLQF EAAWALTNIA SGTSRNTKFE AAWALTNIAS STSENTKVVI DHVIVPTFVK LFASGSDDVR
101: EGKPQPSFDQ TKPALPTLAR IIHSNDEKVL TDACWALSYL SDDTNDKIQA VIEAGVCPWL VELLMY

Best Arabidopsis Sequence Match ( AT3G06720.1 )
(BLAST)

001: MSLRPNAKTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKSK REESLMKKRR EGMQALQGFP SASAASVDKK LDSLKDMVAG VWSDDPALQL ESTTQFRKLL
101: SIERSPPIEE VISAGVVPRF VEFLKKEDYP AIQFEAAWAL TNIASGTSDH TKVVIDHNAV PIFVQLLASP SDDVREQAVW ALGNVAGDSP RCRDLVLGCG
201: ALLPLLNQLN EHAKLSMLRN ATWTLSNFCR GKPQPHFDQV KPALPALERL IHSDDEEVLT DACWALSYLS DGTNDKIQTV IQAGVVPKLV ELLLHHSPSV
301: LIPALRTVGN IVTGDDIQTQ CVINSGALPC LANLLTQNHK KSIKKEACWT ISNITAGNKD QIQTVVEANL ISPLVSLLQN AEFDIKKEAA WAISNATSGG
401: SHDQIKYLVE QGCIKPLCDL LVCPDPRIIT VCLEGLENIL KVGEAEKNLG HTGDMNYYAQ LIDDAEGLEK IENLQSHDNN EIYEKAVKIL ETYWLEEEDD
501: ETQQPPGVDG SQAGFQFGGN QAPVPSGGFN FS

Arabidopsis Description

IMPA1Importin subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A178VHS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.