Factsheet for Zm00001d024033_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042015_P001	Maize	cytosol	30.88	40.36
Bra012740.1-P	Field mustard	cytosol	24.88	34.18
Zm00001d040153_P004	Maize	cytosol	27.19	32.24
Zm00001d040274_P001	Maize	cytosol	38.25	15.69
PGSC0003DMT400038784	Potato	cytosol	37.33	15.31
Zm00001d008345_P003	Maize	cytosol	37.33	15.28
Solyc01g060470.2.1	Tomato	extracellular	37.33	15.28
KRH02317	Soybean	cytosol	36.87	15.09
VIT_05s0077g01430.t01	Wine grape	cytosol	36.41	14.93
KRH11998	Soybean	endoplasmic reticulum	36.41	14.88
KRH37030	Soybean	endoplasmic reticulum, mitochondrion	36.41	14.88
AT4G16143.2	Thale cress	cytosol	36.41	14.77
Bra033534.1-P	Field mustard	cytosol	34.1	13.96
CDY32215	Canola	cytosol	34.1	13.96
CDY34430	Canola	cytosol	34.1	13.96
AT3G06720.2	Thale cress	cytosol	34.1	13.91
Bra038043.1-P	Field mustard	cytosol	34.1	13.86
CDX90544	Canola	cytosol	34.1	13.7
KRH50772	Soybean	cytosol, endoplasmic reticulum	28.57	13.69
CDY52043	Canola	cytosol	33.64	13.67
CDY22779	Canola	cytosol	33.64	13.67
CDY09716	Canola	cytosol	33.64	13.64
Zm00001d037606_P001	Maize	cytosol	33.18	13.64
AT5G49310.1	Thale cress	cytosol	31.8	13.29
Zm00001d009850_P002	Maize	cytosol	33.64	12.67
Zm00001d022536_P008	Maize	cytosol	23.96	9.15
Zm00001d008640_P002	Maize	plastid	21.2	8.75
CDY32170	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	2.3	2.76
Bra012741.1-P	Field mustard	cytosol	4.15	2.52

Protein Annotations

EnsemblPlants:Zm00001d024033_P002	EnsemblPlants:Zm00001d024033_T002	EnsemblPlantsGene:Zm00001d024033	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989
PANTHER:PTHR23316	PANTHER:PTHR23316:SF22	PFAM:PF00514	PFscan:PS50176	ProteinID:AQK40564.1	SEG:seg
SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI000843CA2C	UniProt:A0A1D6IXB9	MapMan:35.1	:

Description

Importin subunit alpha-6

Coordinates

chr10:-:38573014..38575734

Molecular Weight (calculated)

23079.6 Da

IEP (calculated)

9.428

GRAVY (calculated)

-0.055

Length

217 amino acids

Sequence
(BLAST)

001: MAHHASPPVF GALASPSFSP RRRYWLPPPT TPPSSSSLVP TAGSTARSLI LAFVDARRWP ATAVFVHMTP PLALHLSLLG STALWKPTWP DVLAAPRMPH
101: PTSCSATVEH QHPLPLGETE SRASSGRGRD PEAGCGAQEG RGAPIEGVIK PGVVPRFVQF LTREDLSQLQ FEAAWALTNI ASGTSRNTKV VIDHVIVPTF
201: VKLLASGSDE NGFSSAL

Best Arabidopsis Sequence Match ( AT4G16143.1 )
(BLAST)

001: MSLRPNAKTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKSK REESLQKKRR EGLQANQLPQ FAPSPVPASS TVEKKLESLP AMVGGVWSDD RSLQLEATTQ
101: FRKLLSIERS PPIEEVIDAG VVPRFVEFLT REDYPQLQFE AAWALTNIAS GTSENTKVVI EHGAVPIFVQ LLASQSDDVR EQAVWALGNV AGDSPRCRDL
201: VLGQGALIPL LSQLNEHAKL SMLRNATWTL SNFCRGKPQP PFDQVRPALP ALERLIHSTD EEVLTDACWA LSYLSDGTND KIQSVIEAGV VPRLVELLQH
301: QSPSVLIPAL RSIGNIVTGD DLQTQCVISH GALLSLLSLL THNHKKSIKK EACWTISNIT AGNRDQIQAV CEAGLICPLV NLLQNAEFDI KKEAAWAISN
401: ATSGGSPDQI KYMVEQGVVK PLCDLLVCPD PRIITVCLEG LENILKVGEA EKVTGNTGDV NFYAQLIDDA EGLEKIENLQ SHDNSEIYEK AVKILETYWL
501: EEEDETLPPG DPSAQGFQFG GGNDAAVPPG GFNFQ

Arabidopsis Description

IMPA2Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:F4JL11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.