CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012740.1-P	Field mustard	cytosol	29.26	100.0
CDY09716	Canola	cytosol	97.96	98.88
Bra012741.1-P	Field mustard	cytosol	65.19	98.6
CDY22779	Canola	cytosol	94.07	95.13
CDY52043	Canola	cytosol	93.7	94.76
CDY34430	Canola	cytosol	92.59	94.34
CDY32215	Canola	cytosol	92.59	94.34
AT4G16143.2	Thale cress	cytosol	93.33	94.21
VIT_05s0077g01430.t01	Wine grape	cytosol	84.81	86.58
KRH11998	Soybean	endoplasmic reticulum	83.7	85.12
KRH37030	Soybean	endoplasmic reticulum, mitochondrion	83.52	84.93
KRH02317	Soybean	cytosol	82.96	84.53
KRH50772	Soybean	cytosol, endoplasmic reticulum	70.74	84.33
PGSC0003DMT400038784	Potato	cytosol	82.04	83.74
Solyc01g060470.2.1	Tomato	extracellular	82.04	83.58
CDX94988	Canola	cytosol	73.89	73.89
CDY31102	Canola	plasma membrane	73.89	73.62
CDX93514	Canola	cytosol	73.89	73.62
CDY32165	Canola	cytosol	73.52	73.25
CDY01921	Canola	cytosol	68.52	69.68
CDX97257	Canola	cytosol	68.52	69.68
CDY64806	Canola	cytosol	65.56	68.34
CDX89948	Canola	cytosol	65.56	67.95
CDX90948	Canola	cytosol	65.0	67.76
Zm00001d042015_P001	Maize	cytosol	20.37	66.27
CDY05638	Canola	cytosol	63.89	64.73
CDY33917	Canola	cytosol	63.7	64.66
Zm00001d040153_P004	Maize	cytosol	19.81	58.47
CDY27746	Canola	cytosol	57.41	57.2
CDY05194	Canola	cytosol	56.85	57.17
CDY32170	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	16.67	49.72
CDY15260	Canola	cytosol	64.63	45.03
Zm00001d024033_P002	Maize	plastid	13.7	34.1
CDY55698	Canola	cytosol, plastid	28.33	29.42
CDY04878	Canola	plastid	28.33	29.37
CDY10407	Canola	cytosol	25.37	27.73
CDX70330	Canola	cytosol, extracellular	12.78	26.44

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	GO:A0A078DQ42	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Arm_3	InterPro:Armadillo	EnsemblPlants:CDX90544	ProteinID:CDX90544	ProteinID:CDX90544.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565
GO:GO:0061608	EnsemblPlantsGene:GSBRNA2T00151173001	InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:IPR036975
InterPro:Importin-a_IBB	InterPro:Importin-a_IBB_sf	InterPro:Importing_su_alpha	PFAM:PF00514	PFAM:PF01749	PFAM:PF16186
PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF22	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI0004EE8D53	SEG:seg	:	:	:

Description

BnaA03g42370D

Coordinates

chrLK031863:+:762983..766195

Molecular Weight (calculated)

59322.6 Da

IEP (calculated)

4.835

GRAVY (calculated)

-0.245

Length

540 amino acids

Sequence
(BLAST)

001: MSLRPNARTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKTK REESLLKKRR EGLQPTQLPQ FDPSSLASAA AAGASSSVEK RLESLPSMVG GVWSEDRSLQ
101: LEATTQFRKL LSIERSPPIE EVIEAGVVPR FVEFLKREDY PQLQFEAAWA LTNIASGTSD HTKVVIEHGA VPIFVLLLAS QSDDVREQAV WALGNVAGDS
201: PRCRDLVLGQ GALLPLLSQL NEHAKLSMLR NATWTLSNFC RGKPQPPFDQ VRPALPALER LIHSTDEEVL TDACWALSYL SDGTNDKIQS VIEAGVVPRL
301: VELLLHPSPS VLIPALRSIG NIVTGDDTQT QCVISHGALL SLLSLLTHNH KKSIKKEACW TISNITAGNR DQIQAVCEAG VICPLVNLLQ NAEFDIKKEA
401: AWAVSNATSG GSPDQIKYMV EQGVVKPLCD LLICPDPRII TVCLEGLENI LKVGEAEKVT GNTGDVNFYA QLIDDAEGLE KIENLQSHDN SEIYEKAVKI
501: LETYWLEEED ETLPHGDGSA QGFQFGGNDA AAPPGGFNFQ

Best Arabidopsis Sequence Match ( AT4G16143.1 )
(BLAST)

001: MSLRPNAKTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKSK REESLQKKRR EGLQANQLPQ FAPSPVPASS TVEKKLESLP AMVGGVWSDD RSLQLEATTQ
101: FRKLLSIERS PPIEEVIDAG VVPRFVEFLT REDYPQLQFE AAWALTNIAS GTSENTKVVI EHGAVPIFVQ LLASQSDDVR EQAVWALGNV AGDSPRCRDL
201: VLGQGALIPL LSQLNEHAKL SMLRNATWTL SNFCRGKPQP PFDQVRPALP ALERLIHSTD EEVLTDACWA LSYLSDGTND KIQSVIEAGV VPRLVELLQH
301: QSPSVLIPAL RSIGNIVTGD DLQTQCVISH GALLSLLSLL THNHKKSIKK EACWTISNIT AGNRDQIQAV CEAGLICPLV NLLQNAEFDI KKEAAWAISN
401: ATSGGSPDQI KYMVEQGVVK PLCDLLVCPD PRIITVCLEG LENILKVGEA EKVTGNTGDV NFYAQLIDDA EGLEKIENLQ SHDNSEIYEK AVKILETYWL
501: EEEDETLPPG DPSAQGFQFG GGNDAAVPPG GFNFQ

Arabidopsis Description

IMPA2Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:F4JL11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.