CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012741.1-P	Field mustard	cytosol	65.42	98.04
CDX90544	Canola	cytosol	98.88	97.96
Bra012740.1-P	Field mustard	cytosol	28.04	94.94
CDY22779	Canola	cytosol	94.39	94.57
CDY52043	Canola	cytosol	94.02	94.19
CDY34430	Canola	cytosol	93.27	94.15
CDY32215	Canola	cytosol	93.27	94.15
AT4G16143.2	Thale cress	cytosol	94.02	94.02
VIT_05s0077g01430.t01	Wine grape	cytosol	85.61	86.58
KRH11998	Soybean	endoplasmic reticulum	84.49	85.12
KRH37030	Soybean	endoplasmic reticulum, mitochondrion	84.3	84.93
KRH02317	Soybean	cytosol	83.93	84.72
KRH50772	Soybean	cytosol, endoplasmic reticulum	71.59	84.55
Solyc01g060470.2.1	Tomato	extracellular	83.18	83.96
PGSC0003DMT400038784	Potato	cytosol	82.99	83.93
CDX94988	Canola	cytosol	74.58	73.89
CDY31102	Canola	plasma membrane	74.58	73.62
CDX93514	Canola	cytosol	74.58	73.62
CDY32165	Canola	cytosol	74.21	73.25
CDY01921	Canola	cytosol	69.35	69.87
CDX97257	Canola	cytosol	69.35	69.87
CDY64806	Canola	cytosol	66.36	68.53
CDX89948	Canola	cytosol	66.36	68.14
CDX90948	Canola	cytosol	65.79	67.95
Zm00001d042015_P001	Maize	cytosol	20.37	65.66
CDY05638	Canola	cytosol	64.49	64.73
CDY33917	Canola	cytosol	64.3	64.66
Zm00001d040153_P004	Maize	cytosol	19.81	57.92
CDY27746	Canola	cytosol	57.57	56.83
CDY05194	Canola	cytosol	57.01	56.8
CDY32170	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	16.82	49.72
CDY15260	Canola	cytosol	65.23	45.03
Zm00001d024033_P002	Maize	plastid	13.64	33.64
CDY55698	Canola	cytosol, plastid	29.16	30.0
CDY04878	Canola	plastid	29.16	29.94
CDY10407	Canola	cytosol	26.17	28.34
CDX70330	Canola	cytosol, extracellular	13.08	26.82

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	GO:A0A078F8P7	UniProt:A0A078F8P7	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Arm_3	InterPro:Armadillo	EnsemblPlants:CDY09716	ProteinID:CDY09716	ProteinID:CDY09716.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150
GO:GO:0008565	GO:GO:0015031	GO:GO:0061608	EnsemblPlantsGene:GSBRNA2T00031389001	InterPro:IPR000225	InterPro:IPR002652
InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB	InterPro:Importin-a_IBB_sf	InterPro:Importing_su_alpha	PFAM:PF00514
PFAM:PF01749	PFAM:PF16186	PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316
PANTHER:PTHR23316:SF22	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0004EE7EAF	SEG:seg	:

Description

BnaC07g33450DImportin subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A078F8P7]

Coordinates

chrLK031998:+:566032..569212

Molecular Weight (calculated)

58839.0 Da

IEP (calculated)

4.881

GRAVY (calculated)

-0.247

Length

535 amino acids

Sequence
(BLAST)

001: MSLRPNARTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKTK REESLLKKRR EGLQATQLPQ FDPSSLAAAA SSVEKRLESL PSMVGGVWSE DRSLQLEATT
101: QFRKLLSIER SPPIEEVIEA GVVPRFVEFL KRGDYPQLQF EAAWALTNIA SGTSDHTKVV IEHGAVPIFV GLLASQSDDV REQAVWALGN VAGDSPRCRD
201: LVLSQGALLP LLSQLNEHAK LSMLRNATWT LSNFCRGKPQ PPFDQVRPAL PALERLIHST DEEVLTDACW ALSYLSDGTN DKIQSVIEAG VVPRLVELLL
301: HPSPSVLIPA LRSIGNIVTG DDTQTQCVIS HGALLSLLSL LTHNHKKSIK KEACWTISNI TAGNREQIQA VCEAGVICPL VNLLQNAEFD IKKEAAWAVS
401: NATSGGSPDQ IKYMVEQGVV KPLCDLLICP DPRIITVCLE GLENILKVGE AEKVTGNTGD VNFYAQLIDD AEGLEKIENL QSHDNSEIYE KAVKILETYW
501: LEEEDETLPH GDGSAQGFQF GGNDAAAPPG GFNFQ

Best Arabidopsis Sequence Match ( AT4G16143.1 )
(BLAST)

001: MSLRPNAKTE VRRNRYKVAV DAEEGRRRRE DNMVEIRKSK REESLQKKRR EGLQANQLPQ FAPSPVPASS TVEKKLESLP AMVGGVWSDD RSLQLEATTQ
101: FRKLLSIERS PPIEEVIDAG VVPRFVEFLT REDYPQLQFE AAWALTNIAS GTSENTKVVI EHGAVPIFVQ LLASQSDDVR EQAVWALGNV AGDSPRCRDL
201: VLGQGALIPL LSQLNEHAKL SMLRNATWTL SNFCRGKPQP PFDQVRPALP ALERLIHSTD EEVLTDACWA LSYLSDGTND KIQSVIEAGV VPRLVELLQH
301: QSPSVLIPAL RSIGNIVTGD DLQTQCVISH GALLSLLSLL THNHKKSIKK EACWTISNIT AGNRDQIQAV CEAGLICPLV NLLQNAEFDI KKEAAWAISN
401: ATSGGSPDQI KYMVEQGVVK PLCDLLVCPD PRIITVCLEG LENILKVGEA EKVTGNTGDV NFYAQLIDDA EGLEKIENLQ SHDNSEIYEK AVKILETYWL
501: EEEDETLPPG DPSAQGFQFG GGNDAAVPPG GFNFQ

Arabidopsis Description

IMPA2Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:F4JL11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.