CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27746	Canola	cytosol	96.83	95.94
AT3G05720.1	Thale cress	cytosol	86.59	88.07
CDY52043	Canola	cytosol	57.54	57.87
CDY22779	Canola	cytosol	57.36	57.68
CDY34430	Canola	cytosol	56.8	57.55
CDY32215	Canola	cytosol	56.8	57.55
CDY09716	Canola	cytosol	56.8	57.01
CDX90544	Canola	cytosol	57.17	56.85
CDX94988	Canola	cytosol	53.63	53.33
CDY31102	Canola	plasma membrane	53.82	53.32
CDX93514	Canola	cytosol	53.63	53.14
CDY01921	Canola	cytosol	52.51	53.11
CDY32165	Canola	cytosol	53.45	52.95
CDX97257	Canola	cytosol	52.33	52.92
CDX90948	Canola	cytosol	50.09	51.93
CDY64806	Canola	cytosol	49.72	51.54
CDX89948	Canola	cytosol	49.16	50.67
VIT_15s0021g00390.t01	Wine grape	cytosol	5.03	50.0
CDY33917	Canola	cytosol	48.42	48.87
CDY05638	Canola	cytosol	48.04	48.41
CDY32170	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.85	38.12
CDY15260	Canola	cytosol	50.84	35.23
CDY55698	Canola	cytosol, plastid	24.21	25.0
CDY04878	Canola	plastid	24.21	24.95
CDY10407	Canola	cytosol	21.6	23.48
CDX70330	Canola	cytosol, extracellular	11.17	22.99

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	GO:A0A078EX57	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Arm_3	InterPro:Armadillo	EnsemblPlants:CDY05194	ProteinID:CDY05194	ProteinID:CDY05194.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565
GO:GO:0061608	EnsemblPlantsGene:GSBRNA2T00120000001	InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:IPR036975
InterPro:Importin-a_IBB	InterPro:Importin-a_IBB_sf	InterPro:Importing_su_alpha	PFAM:PF00514	PFAM:PF01749	PFAM:PF16186
PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF22	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI0004EE8CE3	SEG:seg	:	:	:

Description

BnaC05g46090D

Coordinates

chrLK031960:-:266232..269336

Molecular Weight (calculated)

59456.5 Da

IEP (calculated)

4.943

GRAVY (calculated)

-0.074

Length

537 amino acids

Sequence
(BLAST)

001: MKGGTTTSWT TTSVRRSGYK AVVDGVGGRR RREEDMVEIR KAKREESLLK KRREALPLPH SPPPSAAVSL DQNLISRIWS DKKELLIEAT TQIRTLLCGE
101: MFNVHVEEVI QAGLVPRFVE FLTWDDFPQL QFEAAWALTN IASGTSENTE VVIDHGAVAI LVRLLSSPYD GVREQVVWAL GNISGDSPRC RDIVLGHGAL
201: PSLLLQLNNG AKLSMLVNAA WTLSNLCRGK PQPPYDQVSA ALPALAQLIR LDDKELLAYT CWALVYISDG SNEKIQAVIE ANVCGRLIGL SVHRSPSVAT
301: PALRTIGIVV TGNDSQTQYI IDLQALPCLL NLLRGPYNKP IRKEACWVVS NITAGCQSQI QSVFDADICP ALVNLLRNSE FDVKYEAAWA ICNAIAGGSY
401: KQILFLVKQD CIKPLCDILT SSDTQLVMLC LESLEKILKV GEACYTRHAE GVYQCTQTNV NPHAQIIEDA EGLEKIESLQ SHENSDIYEM AVKILETYWL
501: EEEEEDKGRQ DMVYFPVEKF ANMPTPSCTL GEMYCGP

Best Arabidopsis Sequence Match ( AT3G05720.2 )
(BLAST)

001: MKGGETMSVR RSGYKAVVDG VGGRRRREDD MVEIRKAKRE ESLLKKRREA LPHSPSADSL DQKLISCIWS DERDLLIEAT TQIRTLLCGE MFNVRVEEVI
101: QAGLVPRFVE FLTWDDSPQL QFEAAWALTN IASGTSENTE VVIDHGAVAI LVRLLNSPYD VVREQVVWAL GNISGDSPRC RDIVLGHAAL PSLLLQLNHG
201: AKLSMLVNAA WTLSNLCRGK PQPPFDQVSA ALPALAQLIR LDDKELLAYT CWALVYLSDG SNEKIQAVIE ANVCARLIGL SIHRSPSVIT PALRTIGNIV
301: TGNDSQTQHI IDLQALPCLV NLLRGSYNKT IRKEACWTVS NITAGCQSQI QAVFDADICP ALVNLLQNSE GDVKKEAAWA ICNAIAGGSY KQIMFLVKQE
401: CIKPLCDLLT CSDTQLVMVC LEALKKILKV GEVFSSRHAE GIYQCPQTNV NPHAQLIEEA EGLEKIEGLQ SHENNDIYET AVKILETYWM EEEEEEDQEQ
501: QDMIYFPVDN FANMPTSSGT LSEMHCGP

Arabidopsis Description

IMPA7Importin subunit alpha-7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9X7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.