Factsheet for AT3G05720.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05194	Canola	cytosol	88.07	86.59
Bra039416.1-P	Field mustard	cytosol	81.82	86.57
CDY27746	Canola	cytosol	88.07	85.79
AT4G16143.2	Thale cress	cytosol	59.28	58.5
AT3G06720.2	Thale cress	cytosol	58.9	58.46
AT1G09270.1	Thale cress	cytosol	55.49	54.46
AT4G02150.1	Thale cress	cytosol	54.55	54.24
AT1G02690.2	Thale cress	cytosol	54.73	53.62
AT5G49310.1	Thale cress	cytosol	50.95	51.83
VIT_15s0021g00390.t01	Wine grape	cytosol	5.11	50.0
AT1G32880.1	Thale cress	cytosol	15.53	44.81
AT5G52000.1	Thale cress	cytosol	37.12	44.44
AT5G49305.2	Thale cress	cytosol	31.06	42.71
AT5G03070.1	Thale cress	cytosol, plastid	24.05	24.47

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	EntrezGene:819741	ProteinID:AAF26125.1	ProteinID:AEE74284.1
ProteinID:ANM65374.1	InterPro:ARM-like	InterPro:ARM-type_fold	ArrayExpress:AT3G05720	EnsemblPlantsGene:AT3G05720	RefSeq:AT3G05720
TAIR:AT3G05720	RefSeq:AT3G05720-TAIR-G	EnsemblPlants:AT3G05720.1	TAIR:AT3G05720.1	InterPro:Arm_3	InterPro:Armadillo
Unigene:At.53194	EMBL:DQ446636	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005635	GO:GO:0005643
GO:GO:0005654	GO:GO:0005737	GO:GO:0005829	GO:GO:0006606	GO:GO:0006607	GO:GO:0006810
GO:GO:0008139	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0061608	Symbol:IMPA-7
InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB	InterPro:Importin-a_IBB_sf
InterPro:Importing_su_alpha	RefSeq:NP_001319482.1	RefSeq:NP_187223.1	PFAM:PF00514	PFAM:PF01749	PFAM:PF16186
PIRSF:PIRSF005673	PO:PO:0000084	PO:PO:0001017	PO:PO:0007616	PO:PO:0009046	PO:PO:0020127
PO:PO:0025195	PO:PO:0025281	PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF22
UniProt:Q9M9X7	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI00000A72C2	SEG:seg	:

Description

IMPA7Importin subunit alpha-7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9X7]

Coordinates

chr3:-:1687583..1691821

Molecular Weight (calculated)

58476.2 Da

IEP (calculated)

4.752

GRAVY (calculated)

-0.105

Length

528 amino acids

Sequence
(BLAST)

001: MKGGETMSVR RSGYKAVVDG VGGRRRREDD MVEIRKAKRE ESLLKKRREA LPHSPSADSL DQKLISCIWS DERDLLIEAT TQIRTLLCGE MFNVRVEEVI
101: QAGLVPRFVE FLTWDDSPQL QFEAAWALTN IASGTSENTE VVIDHGAVAI LVRLLNSPYD VVREQVVWAL GNISGDSPRC RDIVLGHAAL PSLLLQLNHG
201: AKLSMLVNAA WTLSNLCRGK PQPPFDQVSA ALPALAQLIR LDDKELLAYT CWALVYLSDG SNEKIQAVIE ANVCARLIGL SIHRSPSVIT PALRTIGNIV
301: TGNDSQTQHI IDLQALPCLV NLLRGSYNKT IRKEACWTVS NITAGCQSQI QAVFDADICP ALVNLLQNSE GDVKKEAAWA ICNAIAGGSY KQIMFLVKQE
401: CIKPLCDLLT CSDTQLVMVC LEALKKILKV GEVFSSRHAE GIYQCPQTNV NPHAQLIEEA EGLEKIEGLQ SHENNDIYET AVKILETYWM EEEEEEDQEQ
501: QDMIYFPVDN FANMPTSSGT LSEMHCGP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.