CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039416.1-P	Field mustard	cytosol	92.07	100.0
CDY05194	Canola	cytosol	95.94	96.83
AT3G05720.1	Thale cress	cytosol	85.79	88.07
CDY52043	Canola	cytosol	57.38	58.24
CDY22779	Canola	cytosol	57.2	58.05
CDY34430	Canola	cytosol	56.64	57.92
CDY32215	Canola	cytosol	56.64	57.92
CDY09716	Canola	cytosol	56.83	57.57
CDX90544	Canola	cytosol	57.2	57.41
CDY31102	Canola	plasma membrane	53.69	53.69
CDX94988	Canola	cytosol	53.32	53.52
CDY32165	Canola	cytosol	53.32	53.32
CDX93514	Canola	cytosol	53.32	53.32
CDY01921	Canola	cytosol	51.84	52.92
CDX97257	Canola	cytosol	51.66	52.73
CDX90948	Canola	cytosol	50.18	52.51
CDY64806	Canola	cytosol	49.82	52.12
CDX89948	Canola	cytosol	48.52	50.48
VIT_15s0021g00390.t01	Wine grape	cytosol	4.98	50.0
CDY33917	Canola	cytosol	47.97	48.87
CDY05638	Canola	cytosol	47.6	48.41
CDY32170	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.92	38.67
CDY15260	Canola	cytosol	50.18	35.1
CDY55698	Canola	cytosol, plastid	24.54	25.58
CDY04878	Canola	plastid	24.54	25.53
CDY10407	Canola	cytosol	21.59	23.68
CDX70330	Canola	cytosol, extracellular	11.07	22.99

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	GO:A0A078GQR3	UniProt:A0A078GQR3	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Arm_3	InterPro:Armadillo	EnsemblPlants:CDY27746	ProteinID:CDY27746	ProteinID:CDY27746.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150
GO:GO:0008565	GO:GO:0015031	GO:GO:0061608	EnsemblPlantsGene:GSBRNA2T00038548001	InterPro:IPR000225	InterPro:IPR002652
InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB	InterPro:Importin-a_IBB_sf	InterPro:Importing_su_alpha	PFAM:PF00514
PFAM:PF01749	PFAM:PF16186	PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316
PANTHER:PTHR23316:SF22	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0004EEDAEE	SEG:seg	:

Description

BnaA05g31550DImportin subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A078GQR3]

Coordinates

chrLK032209:+:225224..228415

Molecular Weight (calculated)

59876.7 Da

IEP (calculated)

4.642

GRAVY (calculated)

-0.111

Length

542 amino acids

Sequence
(BLAST)

001: MKGGGTTSWT TTSVRRSGYK AVVDGVGGRR RREEDMVEIR KAKREESLLK KRREALPLPH SPPPSAAVSL DQNLISRIWS DKKELLIEAT TQIRTLLCGE
101: MFNVHVEEVI QAGLVPRFVE FLTWDDFPQL QFEAAWALTN IASGTSENTE VVIDHGAVAI LVRLLSSPYD GVREQVVWAL GNISGDSPRC RNIVLGHGAL
201: PSLLLQLNNG AKLSMLVNAA WTLSNLCRGK PQPPYDQVSA ALPALAQLIR LDDKELLAYT CWALVYLSDG SNEKIQAVIE ANVCGRLIGL SVHRSPSVAT
301: PALRTIGIVV TGNDSQTQYI IDLQALPCLL NLLRGPYNKT IRKEACWVVS NITAGCQSQI QAVYDADVCP ALVNLLRNSE FDVKYEAAWA ICNAIAGGSY
401: KQILFLVKQD CIKPLCDILT SSDTQLVMIC LESLEKILKV GEACDTRHAD GNQCTETNVN PHAQLIEDAE GLEKIESLQS HENSDIYEMA VKILETYWLE
501: EEEEDEVEEE DKGRQDIVYF PVDNFANMPT PSCTLGEMYC GP

Best Arabidopsis Sequence Match ( AT3G05720.2 )
(BLAST)

001: MKGGETMSVR RSGYKAVVDG VGGRRRREDD MVEIRKAKRE ESLLKKRREA LPHSPSADSL DQKLISCIWS DERDLLIEAT TQIRTLLCGE MFNVRVEEVI
101: QAGLVPRFVE FLTWDDSPQL QFEAAWALTN IASGTSENTE VVIDHGAVAI LVRLLNSPYD VVREQVVWAL GNISGDSPRC RDIVLGHAAL PSLLLQLNHG
201: AKLSMLVNAA WTLSNLCRGK PQPPFDQVSA ALPALAQLIR LDDKELLAYT CWALVYLSDG SNEKIQAVIE ANVCARLIGL SIHRSPSVIT PALRTIGNIV
301: TGNDSQTQHI IDLQALPCLV NLLRGSYNKT IRKEACWTVS NITAGCQSQI QAVFDADICP ALVNLLQNSE GDVKKEAAWA ICNAIAGGSY KQIMFLVKQE
401: CIKPLCDLLT CSDTQLVMVC LEALKKILKV GEVFSSRHAE GIYQCPQTNV NPHAQLIEEA EGLEKIEGLQ SHENNDIYET AVKILETYWM EEEEEEDQEQ
501: QDMIYFPVDN FANMPTSSGT LSEMHCGP

Arabidopsis Description

IMPA7Importin subunit alpha-7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9X7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.