Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
26746009
|
msms PMID:
26746009
doi
National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China. Electronic address: fangsenxu@mail.hzau.edu.cn., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Agricultural Biotechnology of Liaoning Province, College of Biological Science and Technology, Shenyang Agricultural University, Shenyang 110866, China.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY32165 | Canola | cytosol | 99.08 | 99.08 |
CDX94988 | Canola | cytosol | 96.86 | 97.22 |
CDX93514 | Canola | cytosol | 96.86 | 96.86 |
AT1G09270.1 | Thale cress | cytosol | 92.44 | 93.12 |
PGSC0003DMT400007130 | Potato | cytosol | 82.66 | 83.9 |
VIT_14s0060g00930.t01 | Wine grape | cytosol | 82.66 | 83.74 |
Solyc01g100720.2.1 | Tomato | nucleus | 82.29 | 83.52 |
CDY52043 | Canola | cytosol | 73.8 | 74.91 |
CDY22779 | Canola | cytosol | 73.8 | 74.91 |
CDY09716 | Canola | cytosol | 73.62 | 74.58 |
CDY34430 | Canola | cytosol | 72.69 | 74.34 |
CDY32215 | Canola | cytosol | 72.69 | 74.34 |
CDX90544 | Canola | cytosol | 73.62 | 73.89 |
GSMUA_Achr8P22290_001 | Banana | cytosol | 72.69 | 71.51 |
Bra030765.1-P | Field mustard | cytosol | 99.26 | 71.35 |
CDY01921 | Canola | cytosol | 63.65 | 64.97 |
CDX97257 | Canola | cytosol | 63.47 | 64.78 |
CDY64806 | Canola | cytosol | 60.15 | 62.93 |
CDX90948 | Canola | cytosol | 59.41 | 62.16 |
CDX89948 | Canola | cytosol | 59.41 | 61.8 |
CDY33917 | Canola | cytosol | 58.49 | 59.59 |
CDY05638 | Canola | cytosol | 58.12 | 59.1 |
CDY32170 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 19.56 | 58.56 |
KRG96699 | Soybean | cytosol | 50.92 | 57.02 |
KRG99893 | Soybean | cytosol | 43.91 | 54.34 |
KRH68429 | Soybean | cytosol, plastid | 51.84 | 53.83 |
CDY05194 | Canola | cytosol | 53.32 | 53.82 |
CDY27746 | Canola | cytosol | 53.69 | 53.69 |
KRG99898 | Soybean | cytosol | 43.54 | 53.51 |
KRG99895 | Soybean | cytosol, plastid | 47.79 | 52.97 |
KRG99853 | Soybean | cytosol, plastid | 47.79 | 52.97 |
Os07t0688300-01 | Rice | cytosol | 42.07 | 49.35 |
HORVU2Hr1G016300.1 | Barley | cytosol | 41.51 | 49.34 |
KRG99088 | Soybean | cytosol | 39.11 | 47.64 |
KRG96700 | Soybean | cytosol | 43.36 | 46.35 |
TraesCS2A01G097100.1 | Wheat | cytosol | 46.86 | 45.12 |
TraesCS2B01G112400.2 | Wheat | cytosol | 46.49 | 44.68 |
TraesCS2D01G096200.1 | Wheat | cytosol | 46.49 | 44.68 |
KXG36990 | Sorghum | cytosol | 46.13 | 44.41 |
Zm00001d022536_P008 | Maize | cytosol | 44.65 | 42.61 |
CDY15260 | Canola | cytosol | 59.96 | 41.94 |
CDX70330 | Canola | cytosol, extracellular | 14.39 | 29.89 |
CDY04878 | Canola | plastid | 28.41 | 29.56 |
CDY55698 | Canola | cytosol, plastid | 28.23 | 29.42 |
CDY10407 | Canola | cytosol | 26.01 | 28.54 |
Protein Annotations
Gene3D:1.20.5.690 | Gene3D:1.25.10.10 | MapMan:23.5.1.3 | GO:A0A078H0W1 | UniProt:A0A078H0W1 | InterPro:ARM-like |
InterPro:ARM-type_fold | InterPro:Arm_3 | InterPro:Armadillo | EnsemblPlants:CDY31102 | ProteinID:CDY31102 | ProteinID:CDY31102.1 |
GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006606 | GO:GO:0006810 | GO:GO:0008150 |
GO:GO:0008565 | GO:GO:0015031 | GO:GO:0061608 | EnsemblPlantsGene:GSBRNA2T00047183001 | InterPro:IPR000225 | InterPro:IPR002652 |
InterPro:IPR011989 | InterPro:IPR036975 | InterPro:Importin-a_IBB | InterPro:Importin-a_IBB_sf | InterPro:Importing_su_alpha | PFAM:PF00514 |
PFAM:PF01749 | PFAM:PF16186 | PIRSF:PIRSF005673 | PFscan:PS50176 | PFscan:PS51214 | PANTHER:PTHR23316 |
PANTHER:PTHR23316:SF22 | SMART:SM00185 | SUPFAM:SSF48371 | UniParc:UPI0004EE5359 | SEG:seg | : |
Description
BnaA08g26520DImportin subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A078H0W1]
Coordinates
chrLK032267:-:238351..241553
Molecular Weight (calculated)
59735.3 Da
IEP (calculated)
4.813
GRAVY (calculated)
-0.285
Length
542 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQQQ QPTGAGLDAL QSAAAVEKRL EGIPMMVQGV YSDDPQAQLE
101: ATTQFRKLLS IERSPPIDEV IKAGVIPRFV EFLGRQDHPQ LQFEAAWALT NVASGTSDHT RVVIEHGAVP IFVELLSSAS DDVREQAVWA LGNVAGDSPN
201: CRNLVLSCGA LIPLLSQLNE NSKLSMLRNA TWTLSNFCRG KPPTPFEEVK PALPVLRQLI YLNDEEVLTD ACWALSYLSD GPNDKIQAVI QAGVCPRLVE
301: LLSHPSPTVL IPALRTVGNI VTGDDSQTQF IIDSGVLPHL YNLLTQNHKK SIKKEACWTI SNITAGNQAQ IEAVVGAGLV LPLVHLLQNA EFDIKKEAAW
401: AISNATSGGS HEQIQYLVNQ GCIKPLCDLL ICPDPRIVTV CLEGLENILK ISEADKEMGL NGGVNLYAQI IEESDGLDKI ENLQSHDNNE IYEKAVKILE
501: KYWAEEEDEE QILTDGGNEN PQQGFSFGNN QPAAPPGGFK FG
101: ATTQFRKLLS IERSPPIDEV IKAGVIPRFV EFLGRQDHPQ LQFEAAWALT NVASGTSDHT RVVIEHGAVP IFVELLSSAS DDVREQAVWA LGNVAGDSPN
201: CRNLVLSCGA LIPLLSQLNE NSKLSMLRNA TWTLSNFCRG KPPTPFEEVK PALPVLRQLI YLNDEEVLTD ACWALSYLSD GPNDKIQAVI QAGVCPRLVE
301: LLSHPSPTVL IPALRTVGNI VTGDDSQTQF IIDSGVLPHL YNLLTQNHKK SIKKEACWTI SNITAGNQAQ IEAVVGAGLV LPLVHLLQNA EFDIKKEAAW
401: AISNATSGGS HEQIQYLVNQ GCIKPLCDLL ICPDPRIVTV CLEGLENILK ISEADKEMGL NGGVNLYAQI IEESDGLDKI ENLQSHDNNE IYEKAVKILE
501: KYWAEEEDEE QILTDGGNEN PQQGFSFGNN QPAAPPGGFK FG
001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA
Arabidopsis Description
IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.