CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99898	Soybean	cytosol	98.4	97.73
KRG99853	Soybean	cytosol, plastid	99.09	88.75
KRG99895	Soybean	cytosol, plastid	99.09	88.75
KRH50772	Soybean	cytosol, endoplasmic reticulum	52.74	50.99
KRG99088	Soybean	cytosol	48.86	48.09
Solyc01g100720.2.1	Tomato	nucleus	56.39	46.25
PGSC0003DMT400007130	Potato	cytosol	56.39	46.25
KRG96699	Soybean	cytosol	50.91	46.07
VIT_14s0060g00930.t01	Wine grape	cytosol	55.71	45.61
KRH11998	Soybean	endoplasmic reticulum	53.88	44.44
KRH33847	Soybean	nucleus	53.88	44.36
KRG92948	Soybean	nucleus	53.88	44.36
Bra018570.1-P	Field mustard	cytosol	54.79	44.28
CDX93514	Canola	cytosol	54.79	44.28
KRH37030	Soybean	endoplasmic reticulum, mitochondrion	53.65	44.26
KRH02317	Soybean	cytosol	53.42	44.15
CDX94988	Canola	cytosol	54.34	44.07
AT1G09270.1	Thale cress	cytosol	54.11	44.05
KRH68461	Soybean	nucleus	53.42	43.98
CDY31102	Canola	plasma membrane	54.34	43.91
KRH68429	Soybean	cytosol, plastid	52.28	43.87
KRG96743	Soybean	nucleus	53.2	43.8
CDY32165	Canola	cytosol	53.88	43.54
KRG96700	Soybean	cytosol	45.89	39.65
HORVU2Hr1G016300.1	Barley	cytosol	40.18	38.6
Os07t0688300-01	Rice	cytosol	39.04	37.01
GSMUA_Achr5P27180_001	Banana	cytosol	38.36	36.29
Bra030765.1-P	Field mustard	cytosol	54.34	31.57
KXG36990	Sorghum	cytosol	40.41	31.44
TraesCS2D01G096200.1	Wheat	cytosol	40.41	31.38
TraesCS2B01G112400.2	Wheat	cytosol	39.95	31.03
TraesCS2A01G097100.1	Wheat	cytosol	39.5	30.73
Zm00001d022536_P008	Maize	cytosol	39.73	30.63
KRH19830	Soybean	cytosol, plastid	26.48	22.44
KRH32422	Soybean	plastid	7.76	16.92

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100785398	MapMan:23.5.1.3	UniProt:A0A0R0F1W4	EMBL:ACUP02011338	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Arm_3	InterPro:Armadillo	EnsemblPlantsGene:GLYMA_18G178300	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0061608
InterPro:IPR000225	InterPro:IPR011989	InterPro:Importing_su_alpha	EnsemblPlants:KRG99893	ProteinID:KRG99893	ProteinID:KRG99893.1
PFAM:PF00514	PFAM:PF16186	PIRSF:PIRSF005673	PFscan:PS50176	PANTHER:PTHR23316	PANTHER:PTHR23316:SF17
SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0006ED7D35	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:+:42682626..42685739

Molecular Weight (calculated)

48783.6 Da

IEP (calculated)

4.668

GRAVY (calculated)

-0.022

Length

438 amino acids

Sequence
(BLAST)

001: MKQRLWSESA AEQFEGTIHF RKLLANGHPP IDEVIKADVV PRIVEFLESD GLHQLQFEAL WVLTNIASGT SQHKRAVIDH GAVPKLVKLL SPTNNYDDVR
101: EQAVWVLGNI AFDSPCYSDL ILNEHALLPL LSLLNPPSPI LSMLRITTWT LSNLVRGKPP VTLEQVKTLM PVLKTLIHNS DEEVVSDACW ALFYISDVSS
201: DTTKTIVEAE FCVKLVDLLT NSSLTVIVPV LRTLGNIVAG DDAQTQLTID KGLIPGLSKQ LLISRDKEQI YKETCWTISN ITAGNGAQIQ AIIDAHIIPV
301: LVAIVIYRKD CEIDLKKEVA WAISNATRGS HDQIRYLVDQ SCIQALCDLL AYPNSEIVSN CLEGLENILV VGEVDKDIDR GNSFAERVDK CDGWGMIENL
401: KSHDKKEIKE RAARIFKTFW AEDDLVEDTD LQDDLGRG

Best Arabidopsis Sequence Match ( AT1G09270.1 )
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA

Arabidopsis Description

IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.