Factsheet for Bra018570.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93514	Canola	cytosol	99.82	99.82
AT1G09270.1	Thale cress	cytosol	92.25	92.94
VIT_14s0060g00930.t01	Wine grape	cytosol	82.47	83.55
PGSC0003DMT400007130	Potato	cytosol	82.29	83.52
Solyc01g100720.2.1	Tomato	nucleus	81.92	83.15
Bra038043.1-P	Field mustard	cytosol	73.06	74.16
Bra012741.1-P	Field mustard	cytosol	48.52	73.67
Bra033534.1-P	Field mustard	cytosol	71.96	73.58
GSMUA_Achr8P22290_001	Banana	cytosol	72.51	71.32
Bra030765.1-P	Field mustard	cytosol	96.86	69.63
Bra012740.1-P	Field mustard	cytosol	20.11	68.99
Bra008559.1-P	Field mustard	cytosol	63.28	64.6
Bra033342.1-P	Field mustard	cytosol	59.78	62.19
Bra000891.1-P	Field mustard	cytosol	59.41	62.16
Bra020649.1-P	Field mustard	cytosol	58.49	59.59
KRG96699	Soybean	cytosol	50.74	56.82
KRG99893	Soybean	cytosol	44.28	54.79
KRH68429	Soybean	cytosol, plastid	52.21	54.21
KRG99898	Soybean	cytosol	43.91	53.97
KRG99853	Soybean	cytosol, plastid	48.16	53.37
KRG99895	Soybean	cytosol, plastid	48.16	53.37
Bra039416.1-P	Field mustard	cytosol	48.71	52.91
Bra030771.1-P	Field mustard	cytosol	41.51	51.72
Os07t0688300-01	Rice	cytosol	42.07	49.35
HORVU2Hr1G016300.1	Barley	cytosol	41.51	49.34
KRG99088	Soybean	cytosol	39.48	48.09
KRG96700	Soybean	cytosol	44.28	47.34
TraesCS2D01G096200.1	Wheat	cytosol	46.86	45.04
KXG36990	Sorghum	cytosol	46.49	44.76
TraesCS2A01G097100.1	Wheat	cytosol	46.49	44.76
TraesCS2B01G112400.2	Wheat	cytosol	46.49	44.68
Zm00001d022536_P008	Maize	cytosol	45.2	43.13
Bra009550.1-P	Field mustard	plastid	15.31	28.42
Bra028852.1-P	Field mustard	cytosol	27.12	27.89

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Arm_3
InterPro:Armadillo	EnsemblPlantsGene:Bra018570	EnsemblPlants:Bra018570.1	EnsemblPlants:Bra018570.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031
GO:GO:0061608	InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB
InterPro:Importin-a_IBB_sf	InterPro:Importing_su_alpha	UniProt:M4DPX9	PFAM:PF00514	PFAM:PF01749	PFAM:PF16186
PIRSF:PIRSF005673	PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF53	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI000253E82D	SEG:seg	:	:	:

Description

AT1G09270 (E=6e-270) IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4); binding / protein transporter

Coordinates

chrA06:+:3171559..3174195

Molecular Weight (calculated)

59800.5 Da

IEP (calculated)

4.922

GRAVY (calculated)

-0.259

Length

542 amino acids

Sequence
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRRNK REDSLLKKRR EGMMLQQQQQ PLGAAGLDAL QSAAAVEKRL EGIPMMVQGV YSEDPQAQLE
101: ATTQFRKLLS IERSPPIDEV IKAGVIPRFV EFLRRQDHPQ LQFEAAWALT NVASGTSDHT RVVIEHGAVP IFVELLSSAS DDVREQAVWA LGNVAGDSPN
201: CRNLVLSCGA LAPLLSQLNE NSKLSMLRNA TWTLSNFCRG KPPTPFEEVK PALPVLRQLI YLNDEEVLTD ACWALSYLSD GPNDKIQAVI QAGVCPRLVE
301: LLSHPSPTVL IPALRTVGNI VTGDDSQTQF IIDSGVLPHL YNLLTQNHKK SIKKEACWTI SNITAGNKVQ IEAVVGAGIV LPLVHLLQNA EFDIKKEAAW
401: AISNATSGGS HEQIQYLVAQ GCIKPLCDLL ICPDPRIVTV CLEGLENILK IGEADKEMGL NGGVNLYAQI VEESDGLDKI ENLQSHDNNE IYEKAVKILE
501: RYWAEEEEDE QILPDGVNEN PQQGFSFGNN QTAAPPGGFK FG

Best Arabidopsis Sequence Match ( AT1G09270.2 )
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA

Arabidopsis Description

IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.