CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96699	Soybean	cytosol	59.77	64.46
PGSC0003DMT400007130	Potato	cytosol	56.9	55.62
Solyc01g100720.2.1	Tomato	nucleus	56.7	55.43
VIT_14s0060g00930.t01	Wine grape	cytosol	56.51	55.14
KRG96700	Soybean	cytosol	51.15	52.66
CDX94988	Canola	cytosol	54.21	52.41
CDX93514	Canola	cytosol	54.41	52.4
KRG99893	Soybean	cytosol	43.87	52.28
AT1G09270.1	Thale cress	cytosol	53.83	52.23
Bra018570.1-P	Field mustard	cytosol	54.21	52.21
KRH50772	Soybean	cytosol, endoplasmic reticulum	45.02	51.88
CDY31102	Canola	plasma membrane	53.83	51.84
KRG99898	Soybean	cytosol	43.49	51.47
KRG99853	Soybean	cytosol, plastid	48.08	51.33
KRG99895	Soybean	cytosol, plastid	48.08	51.33
CDY32165	Canola	cytosol	53.26	51.29
KRG92948	Soybean	nucleus	52.11	51.13
KRH33847	Soybean	nucleus	52.11	51.13
KRH68461	Soybean	nucleus	51.34	50.38
KRH11998	Soybean	endoplasmic reticulum	51.15	50.28
KRH37030	Soybean	endoplasmic reticulum, mitochondrion	50.96	50.09
KRG96743	Soybean	nucleus	50.96	50.0
KRH02317	Soybean	cytosol	50.38	49.62
KRG99088	Soybean	cytosol	41.76	48.99
GSMUA_Achr5P27180_001	Banana	cytosol	39.27	44.28
HORVU2Hr1G016300.1	Barley	cytosol	34.48	39.47
Os07t0688300-01	Rice	cytosol	34.87	39.39
Bra030765.1-P	Field mustard	cytosol	53.45	37.0
KXG36990	Sorghum	cytosol	39.46	36.59
Zm00001d022536_P008	Maize	cytosol	39.66	36.44
TraesCS2D01G096200.1	Wheat	cytosol	38.7	35.82
TraesCS2A01G097100.1	Wheat	cytosol	38.51	35.7
TraesCS2B01G112400.2	Wheat	cytosol	38.12	35.28
KRH19830	Soybean	cytosol, plastid	23.37	23.6
KRH32422	Soybean	plastid	7.09	18.41

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.3	UniProt:A0A0R0KMV9	EMBL:ACUP02002116	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Arm_3	InterPro:Armadillo	EnsemblPlantsGene:GLYMA_03G230700	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005635
GO:GO:0005643	GO:GO:0005654	GO:GO:0005737	GO:GO:0005829	GO:GO:0006606	GO:GO:0006607
GO:GO:0006810	GO:GO:0008139	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0061608
InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:Importin-a_IBB	InterPro:Importing_su_alpha	EnsemblPlants:KRH68429
ProteinID:KRH68429	ProteinID:KRH68429.1	PFAM:PF00514	PFAM:PF01749	PFAM:PF16186	PIRSF:PIRSF005673
PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF17	SMART:SM00185	SUPFAM:SSF48371
UniParc:UPI0006EDE548	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:43219491..43222506

Molecular Weight (calculated)

58069.4 Da

IEP (calculated)

5.596

GRAVY (calculated)

0.021

Length

522 amino acids

Sequence
(BLAST)

001: MSLRPGSGSA SAWATRKKSY KSGIDPREIR RRREEDLFGI RKNKRHDTLF NKRTQTHTTH SRNTFLEAIS AMVDHICSEF PPAELEKTRH AEILSSLAAQ
101: CPSIDDVIEQ GIVPRFATFL SRDDAPQLQL GAILILTSIA CGSSQHKRVI VELGLVPSFV NLLSSSSNDD IKEEIVCALG FIAIDSPSYR DLVLNHGVLL
201: PLLSLLNPLP RLSMVRVTTW TLYSLVRGKP PVNFEQVKPV LPVLHQLIHQ TDEEVVADAC LALSYLSEVS IDKIQDIIDA GVCPKLVELL HRCQSDKVVL
301: PALRTLGNIV TGDDAQTQVV IDNGVLPCLC QVLTREYKKM IHKEACWTIS NIAGGNRAQI QAVIKANIIP PLIQILQHAE FDVKKESAWA ILSITVGGSR
401: DHIRFVAAQG CIKGLCDLLS CPDPEVVSIC LEGLENILWV GEADKEVGLH DSVNIYAQRV EECEGLDKIQ KLLVHDNDEI FEMALRILKK FWPVLENDLE
501: AILDLHIEPD GEEYILDIQI AR

Best Arabidopsis Sequence Match ( AT1G09270.1 )
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA

Arabidopsis Description

IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.