CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19830	Soybean	cytosol, plastid	90.55	35.2
VIT_08s0040g02290.t01	Wine grape	cytosol	73.63	28.63
PGSC0003DMT400027134	Potato	cytosol	71.64	27.69
CDY55698	Canola	cytosol, plastid	71.64	27.69
Bra028852.1-P	Field mustard	cytosol	72.14	27.51
CDY04878	Canola	plastid	71.14	27.45
AT5G03070.1	Thale cress	cytosol, plastid	70.65	27.36
Solyc10g084270.1.1	Tomato	cytosol	69.65	26.92
Zm00001d008640_P002	Maize	plastid	63.68	24.33
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	62.69	24.18
Os01t0158000-01	Rice	cytosol	63.18	24.05
TraesCS3B01G152900.1	Wheat	plastid	61.69	23.66
HORVU3Hr1G025640.2	Barley	plastid	61.19	23.47
EES02429	Sorghum	plastid	63.68	22.65
TraesCS3D01G135500.2	Wheat	plastid	61.69	22.06
TraesCS3A01G309900.2	Wheat	plastid	61.69	22.06
CDY10407	Canola	cytosol	51.24	20.85
KRH02317	Soybean	cytosol	29.35	11.13
KRH37030	Soybean	endoplasmic reticulum, mitochondrion	28.86	10.92
KRH11998	Soybean	endoplasmic reticulum	28.86	10.92
KRH68461	Soybean	nucleus	28.36	10.71
KRG96743	Soybean	nucleus	28.36	10.71
KRH33847	Soybean	nucleus	27.36	10.34
KRG92948	Soybean	nucleus	27.36	10.34
KRG99088	Soybean	cytosol	20.4	9.21
KRG99895	Soybean	cytosol, plastid	20.9	8.59
KRG99853	Soybean	cytosol, plastid	20.9	8.59
KRH50772	Soybean	cytosol, endoplasmic reticulum	18.41	8.17
KRG99893	Soybean	cytosol	16.92	7.76
KRG99898	Soybean	cytosol	16.92	7.71
KRH68429	Soybean	cytosol, plastid	18.41	7.09
KRG96699	Soybean	cytosol	16.92	7.02
KRG96700	Soybean	cytosol	15.92	6.31
Bra009550.1-P	Field mustard	plastid	6.47	4.45
CDX70330	Canola	cytosol, extracellular	1.49	1.15

Protein Annotations

EMBL:ACUP02006116	EnsemblPlants:KRH32422	EnsemblPlantsGene:GLYMA_10G050200	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989
PANTHER:PTHR23316	PANTHER:PTHR23316:SF1	PFAM:PF00514	ProteinID:KRH32422	ProteinID:KRH32422.1	SEG:seg
SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI000294F3AA	UniProt:K7LHJ0	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr10:-:4507295..4510116

Molecular Weight (calculated)

21844.3 Da

IEP (calculated)

7.944

GRAVY (calculated)

-0.186

Length

201 amino acids

Sequence
(BLAST)

001: MADSGFTSDR RDPIKSSVGN AAASRRRQHA VTVGKERRES LMRAKRLCRV GIGGGNGEFS VDSVMLTDEE QSILESQTLA AVENLKSALA FQGKGAVKKR
101: VGALQELRRL LSRSEFPPVE SAINAGAVPL LMQCLSFGSP EEQVLEAAWC LTNIAAGNPE ETEALLPALP LLIAHLGEKS YPPVAEQCAW RWEMWLVKVK
201: S

Best Arabidopsis Sequence Match ( AT5G03070.1 )
(BLAST)

001: MADDGSASNR RDPIKSSVGN VAGQRRRKQA VTVAKERREL LVRAKRLCRV GTNGDVEDAL VENEMMVDEE QPILEAQASK SVEELKSAVQ YQGKGAMQKR
101: VTALRELRRL LSKSEFPPVE AALRAGAIPL LVQCLSFGSP DEQLLESAWC LTNIAAGKPE ETKALLPALP LLIAHLGEKS SAPVAEQCAW AIGNVAGEGE
201: DLRNVLLSQG ALPPLARMIF PDKGSTVRTA AWALSNLIKG PESKAAAQLV KIDGILDAIL RHLKKTDEET ATEIAWIIVY LSALSDIATS MLLKGGILQL
301: LIDRLATSSS LQLLIPVLRS LGNFVAVDPK AVLTILIREQ NTEESIIGVL AKCLRSEHRV LKKEAAWVLS NIAAGSIEHK RMIHSTEVMP LLLRILSTSP
401: FDIRKEVAYV LGNLCVESAE GDRKPRIIQE HLVSIVSGGC LRGFIELVRS PDIEAARLGL QFIELVLRGM PNGEGPKLVE GEDGIDAMER FQFHENEELR
501: VMANSLVDKY FGEDYGIDE

Arabidopsis Description

IMPA9Importin subunit alpha-9 [Source:UniProtKB/Swiss-Prot;Acc:F4KF65]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.