Factsheet for TraesCS3D01G135500.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G309900.2	Wheat	plastid	99.82	99.82
TraesCS3B01G152900.1	Wheat	plastid	92.53	99.24
HORVU3Hr1G025640.2	Barley	plastid	92.53	99.24
Zm00001d008640_P002	Maize	plastid	80.78	86.31
Os01t0158000-01	Rice	cytosol	77.94	82.95
EES02429	Sorghum	plastid	81.85	81.42
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	65.48	70.63
VIT_08s0040g02290.t01	Wine grape	cytosol	62.1	67.5
KRH19830	Soybean	cytosol, plastid	61.57	66.92
CDY55698	Canola	cytosol, plastid	58.72	63.46
CDY04878	Canola	plastid	58.36	62.96
AT5G03070.1	Thale cress	cytosol, plastid	58.01	62.81
PGSC0003DMT400027134	Potato	cytosol	57.83	62.5
KRH32422	Soybean	plastid	22.06	61.69
Solyc10g084270.1.1	Tomato	cytosol	56.94	61.54
CDX70330	Canola	cytosol, extracellular	28.29	60.92
Bra028852.1-P	Field mustard	cytosol	56.76	60.53
CDY10407	Canola	cytosol	52.49	59.72
Bra009550.1-P	Field mustard	plastid	30.78	59.25
TraesCS3D01G178500.1	Wheat	cytosol	28.29	30.34
TraesCS1D01G106200.1	Wheat	cytosol	27.4	28.84
TraesCS2D01G096200.1	Wheat	cytosol	23.31	23.23

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	GO:GO:0003674
GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150
GO:GO:0061608	InterPro:IPR000225	InterPro:IPR011989	InterPro:Importing_su_alpha	PFAM:PF00514	PIRSF:PIRSF005673
PANTHER:PTHR23316	PANTHER:PTHR23316:SF1	SMART:SM00185	SUPFAM:SSF48371	EnsemblPlantsGene:TraesCS3D01G135500	EnsemblPlants:TraesCS3D01G135500.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:94508642..94513605

Molecular Weight (calculated)

60819.5 Da

IEP (calculated)

6.149

GRAVY (calculated)

0.018

Length

562 amino acids

Sequence
(BLAST)

001: MADGNAPGSP ASSLQSHRYA IKSSVHNTAA SRRREQAIAI GKERREALMR AKRVCRAPLS GSDEATIEDG DMVIDEKADL ETRTAQAVEE LKSALSSQGK
101: GAQKKKIEAL RAVRRVLSQS EVPPIQVAIK AGAVPLLVQY LSFGSSDEQL LEAAWCLTNI AAGEPEETKS VLPALPLLVA HLGEKSSTLV AEQCAWAIGN
201: VAGEGADLRS TLIAQGALWP LARLMLSSKG STARTAAWAL SNLIKVMISC FDCMSLKFLM PEFNSYLFPS SYYGLGVLRQ KRKGPDPKAA YELINIDGVL
301: NAIIRNLEKA DEELATEVAW VVVYLSALSE KAISLIVRSH VPQLLIGRLL ASENLQLLIP VLRGLGNLVA GDEYMVDSIL IVGNSITDQA LSSLIKCLKS
401: DNRVLRKEAS WALSNIAAGS FEHKKLIFTS EATPSLIHLL TSAQFDIRKE AAYTLGNLCV VPAGSTEPPN IITEHLVSII NGGALPGFIN LVRSADIESA
501: RLGLQFLELV MRGYPNGQGP QLVERGDGIE AMERFQFHEN EAMRNMANGL VDKYFGEDYG LE

Best Arabidopsis Sequence Match ( AT5G03070.1 )
(BLAST)

001: MADDGSASNR RDPIKSSVGN VAGQRRRKQA VTVAKERREL LVRAKRLCRV GTNGDVEDAL VENEMMVDEE QPILEAQASK SVEELKSAVQ YQGKGAMQKR
101: VTALRELRRL LSKSEFPPVE AALRAGAIPL LVQCLSFGSP DEQLLESAWC LTNIAAGKPE ETKALLPALP LLIAHLGEKS SAPVAEQCAW AIGNVAGEGE
201: DLRNVLLSQG ALPPLARMIF PDKGSTVRTA AWALSNLIKG PESKAAAQLV KIDGILDAIL RHLKKTDEET ATEIAWIIVY LSALSDIATS MLLKGGILQL
301: LIDRLATSSS LQLLIPVLRS LGNFVAVDPK AVLTILIREQ NTEESIIGVL AKCLRSEHRV LKKEAAWVLS NIAAGSIEHK RMIHSTEVMP LLLRILSTSP
401: FDIRKEVAYV LGNLCVESAE GDRKPRIIQE HLVSIVSGGC LRGFIELVRS PDIEAARLGL QFIELVLRGM PNGEGPKLVE GEDGIDAMER FQFHENEELR
501: VMANSLVDKY FGEDYGIDE

Arabidopsis Description

IMPA9Importin subunit alpha-9 [Source:UniProtKB/Swiss-Prot;Acc:F4KF65]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.