Factsheet for Bra009550.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70330	Canola	cytosol, extracellular	86.99	97.32
AT5G03070.1	Thale cress	cytosol, plastid	83.9	47.21
Bra028852.1-P	Field mustard	cytosol	76.71	42.5
VIT_08s0040g02290.t01	Wine grape	cytosol	67.81	38.3
KRH19830	Soybean	cytosol, plastid	65.75	37.14
PGSC0003DMT400027134	Potato	cytosol	62.67	35.19
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	61.64	34.55
Solyc10g084270.1.1	Tomato	cytosol	61.3	34.42
TraesCS3B01G152900.1	Wheat	plastid	59.25	33.02
Zm00001d008640_P002	Maize	plastid	59.25	32.89
HORVU3Hr1G025640.2	Barley	plastid	58.9	32.82
TraesCS3D01G135500.2	Wheat	plastid	59.25	30.78
Os01t0158000-01	Rice	cytosol	55.48	30.68
TraesCS3A01G309900.2	Wheat	plastid	58.9	30.61
EES02429	Sorghum	plastid	57.53	29.73
Bra012741.1-P	Field mustard	cytosol	23.97	19.61
Bra018570.1-P	Field mustard	cytosol	28.42	15.31
Bra033534.1-P	Field mustard	cytosol	25.68	14.15
Bra008559.1-P	Field mustard	cytosol	25.34	13.94
Bra000891.1-P	Field mustard	cytosol	24.32	13.71
Bra033342.1-P	Field mustard	cytosol	24.32	13.63
Bra038043.1-P	Field mustard	cytosol	24.66	13.48
Bra020649.1-P	Field mustard	cytosol	22.6	12.41
Bra039416.1-P	Field mustard	cytosol	19.18	11.22
Bra030765.1-P	Field mustard	cytosol	27.74	10.74
Bra030771.1-P	Field mustard	cytosol	11.99	8.05
KRH32422	Soybean	plastid	4.45	6.47
Bra012740.1-P	Field mustard	cytosol	1.37	2.53

Protein Annotations

EnsemblPlants:Bra009550.1	EnsemblPlants:Bra009550.1-P	EnsemblPlantsGene:Bra009550	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989
PANTHER:PTHR23316	PANTHER:PTHR23316:SF1	SEG:seg	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0002547C2B
UniProt:M4CZA3	MapMan:35.1	:	:	:	:

Description

AT5G03070 (E=1e-125) IMPA-9 | IMPA-9 (IMPORTIN ALPHA ISOFORM 9); binding

Coordinates

chrA10:+:17192672..17201954

Molecular Weight (calculated)

31678.5 Da

IEP (calculated)

4.612

GRAVY (calculated)

0.211

Length

292 amino acids

Sequence
(BLAST)

001: MAMLETMSKC FSSSSSSFSS ASHGASFSVP DPPLSLPSRD EEIAMEIAWI IVYLSALSDI ATSMLLKGGI LQLLVERLAS SDSLQLLIPV LRSLGNLVSV
101: DPKAMLTILI GGKNTEESVI GVLAKCLRSD HRVLKKEAAW VLSNIAAGSI EHKRMIHSTE AMPLLIGLLS TSPFDIRKEV AYVLGNLCVE SAEGDTKPRI
201: IQEHLVSIVS GGCLPGFINL VRSPDIEAAR LGLQFIELVL RGMPNGEGSM IVEGEDGIDA MERFQFHENE ELRVMANSLV DKYFGEDYGI NE

Best Arabidopsis Sequence Match ( AT5G03070.1 )
(BLAST)

001: MADDGSASNR RDPIKSSVGN VAGQRRRKQA VTVAKERREL LVRAKRLCRV GTNGDVEDAL VENEMMVDEE QPILEAQASK SVEELKSAVQ YQGKGAMQKR
101: VTALRELRRL LSKSEFPPVE AALRAGAIPL LVQCLSFGSP DEQLLESAWC LTNIAAGKPE ETKALLPALP LLIAHLGEKS SAPVAEQCAW AIGNVAGEGE
201: DLRNVLLSQG ALPPLARMIF PDKGSTVRTA AWALSNLIKG PESKAAAQLV KIDGILDAIL RHLKKTDEET ATEIAWIIVY LSALSDIATS MLLKGGILQL
301: LIDRLATSSS LQLLIPVLRS LGNFVAVDPK AVLTILIREQ NTEESIIGVL AKCLRSEHRV LKKEAAWVLS NIAAGSIEHK RMIHSTEVMP LLLRILSTSP
401: FDIRKEVAYV LGNLCVESAE GDRKPRIIQE HLVSIVSGGC LRGFIELVRS PDIEAARLGL QFIELVLRGM PNGEGPKLVE GEDGIDAMER FQFHENEELR
501: VMANSLVDKY FGEDYGIDE

Arabidopsis Description

IMPA9Importin subunit alpha-9 [Source:UniProtKB/Swiss-Prot;Acc:F4KF65]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.