Factsheet for Bra030771.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
endoplasmic reticulum 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0183g00040.t01	Wine grape	cytosol	16.32	44.94
Bra018570.1-P	Field mustard	cytosol	51.72	41.51
Bra038043.1-P	Field mustard	cytosol	45.29	36.89
Bra033534.1-P	Field mustard	cytosol	44.37	36.42
Bra012740.1-P	Field mustard	cytosol	12.41	34.18
Bra012741.1-P	Field mustard	cytosol	27.36	33.33
Os01t0343200-01	Rice	cytosol	42.3	32.62
Bra008559.1-P	Field mustard	cytosol	39.54	32.39
Bra039416.1-P	Field mustard	cytosol	36.78	32.06
Bra000891.1-P	Field mustard	cytosol	37.93	31.85
VIT_00s0183g00210.t01	Wine grape	cytosol	20.92	31.16
Bra033342.1-P	Field mustard	cytosol	36.78	30.71
Bra020649.1-P	Field mustard	cytosol	37.47	30.64
Bra030765.1-P	Field mustard	cytosol	52.18	30.11
KXG32452	Sorghum	cytosol	23.45	26.91
Bra028852.1-P	Field mustard	cytosol	17.93	14.8
Bra009550.1-P	Field mustard	plastid	8.05	11.99

Protein Annotations

Gene3D:1.25.10.10	Gene3D:2.30.240.10	MapMan:23.5.1.3	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
InterPro:At5g01610-like	EnsemblPlantsGene:Bra030771	EnsemblPlants:Bra030771.1	EnsemblPlants:Bra030771.1-P	InterPro:DUF538	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000225	InterPro:IPR011989	InterPro:IPR036758	UniProt:M4EPQ1
PFAM:PF00514	PFAM:PF04398	PFscan:PS50176	PANTHER:PTHR23316	PANTHER:PTHR23316:SF53	SMART:SM00185
SUPFAM:SSF141562	SUPFAM:SSF48371	UniParc:UPI00025467D0	SEG:seg	:	:

Description

AT1G09270 (E=3e-097) IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4); binding / protein transporter

Coordinates

chrA08:-:20422479..20424621

Molecular Weight (calculated)

48532.2 Da

IEP (calculated)

6.398

GRAVY (calculated)

-0.259

Length

435 amino acids

Sequence
(BLAST)

001: MPREDKSLPQ RNIYAQWFTT IEEVGYDRES GVVWLKQKQS ITHKFETIDK LVSYGTEVTA VVQTGKIKKL TGVKAKELLI WVSVSEIYTE EKEKITFKSP
101: TTLSRTFPVS AFVVPEEVEP AKEEPVKEKS SEAAAERPKS IEVYFNNVIY RYEVIKAGVI PRFVEFLGRQ DHPQLQFEAA WALTNVASGT SDHTRVVIEH
201: GAVPIFVELL SSASDEVREQ AVWDLGNVAS CGALIPLLSQ LNENSKLSML RNATCTLSDF CRGKPPTQFE EVELENLILS PALPVLRQLI YLNDEEVLTD
301: ACWALSYLSD GPNDKIQAVI QDGVCPRLVE LLSHPSPTVL IPALRTVGNI VTGDDSQTLF IIDSGASEVS SFPRMDLMST PLTPAQIQAN LDRKRAAKAA
401: ADRKRAADKK KENKKFNAAV KKRQENTLRM LGIKK

Best Arabidopsis Sequence Match ( AT1G09270.1 )
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA

Arabidopsis Description

IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.