Factsheet for Bra030765.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31102	Canola	plasma membrane	71.35	99.26
CDY32165	Canola	cytosol	71.22	99.08
Bra018570.1-P	Field mustard	cytosol	69.63	96.86
AT1G09270.1	Thale cress	cytosol	66.45	93.12
VIT_14s0060g00930.t01	Wine grape	cytosol	59.28	83.55
PGSC0003DMT400007130	Potato	cytosol	59.02	83.33
Solyc01g100720.2.1	Tomato	nucleus	58.75	82.96
Bra038043.1-P	Field mustard	cytosol	52.92	74.72
Bra033534.1-P	Field mustard	cytosol	52.12	74.15
Bra012741.1-P	Field mustard	cytosol	34.88	73.67
GSMUA_Achr8P22290_001	Banana	cytosol	52.12	71.32
Bra012740.1-P	Field mustard	cytosol	14.46	68.99
Bra008559.1-P	Field mustard	cytosol	45.49	64.6
Bra000891.1-P	Field mustard	cytosol	42.57	61.97
Bra033342.1-P	Field mustard	cytosol	42.71	61.8
Bra020649.1-P	Field mustard	cytosol	42.18	59.77
KRG96699	Soybean	cytosol	36.34	56.61
KRG99893	Soybean	cytosol	31.57	54.34
KRG99898	Soybean	cytosol	31.3	53.51
Bra039416.1-P	Field mustard	cytosol	35.41	53.51
KRH68429	Soybean	cytosol, plastid	37.0	53.45
KRG99853	Soybean	cytosol, plastid	34.35	52.97
KRG99895	Soybean	cytosol, plastid	34.35	52.97
Bra030771.1-P	Field mustard	cytosol	30.11	52.18
Os07t0688300-01	Rice	cytosol	30.11	49.13
HORVU2Hr1G016300.1	Barley	cytosol	29.71	49.12
KRG99088	Soybean	cytosol	27.98	47.42
KRG96700	Soybean	cytosol	31.17	46.35
TraesCS2A01G097100.1	Wheat	cytosol	33.42	44.76
TraesCS2B01G112400.2	Wheat	cytosol	33.42	44.68
TraesCS2D01G096200.1	Wheat	cytosol	33.42	44.68
KXG36990	Sorghum	cytosol	33.16	44.41
Zm00001d022536_P008	Maize	cytosol	32.23	42.78
Bra009550.1-P	Field mustard	plastid	10.74	27.74
Bra028852.1-P	Field mustard	cytosol	19.36	27.7

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Arm_3
InterPro:Armadillo	EnsemblPlantsGene:Bra030765	EnsemblPlants:Bra030765.1	EnsemblPlants:Bra030765.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0061608
InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB	InterPro:Importin-a_IBB_sf
UniProt:M4EPP5	PFAM:PF00514	PFAM:PF01749	PFAM:PF16186	PFscan:PS50176	PFscan:PS51214
PANTHER:PTHR23316	PANTHER:PTHR23316:SF22	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI00025467D6	SEG:seg

Description

AT1G09270 (E=5e-231) IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4); binding / protein transporter

Coordinates

chrA08:-:20436291..20440319

Molecular Weight (calculated)

82768.2 Da

IEP (calculated)

4.748

GRAVY (calculated)

-0.157

Length

754 amino acids

Sequence
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQQQ QPLGAGLDAL QSAAAVEKRL EGIPMMVQGV YSDDPQAQLE
101: ATTQFRKLLS IERSPPIDEV IKAGVIPRFV EFLGRQDHPQ LQFEAAWALT NVASGTSDHT RVVIEHGAVP IFVELLSSAS DDVREQAVWA LGNVAGDSPN
201: CRNLFLSCGA LIPLLSQLNE NSKLSMLRNA TWTLSNFCRG KPPTPFEEVK PALPVLRQLI YLNDEEVLTD ACWALSYLSD GPNDKIQAVI QAGVCPRLVE
301: LLSHPSPTVL IPALRTVGNI VTGDDSQTQF IIDSGVLPHL YNLLTQNHKK SIKKEACWTI SNITAGNQAQ IEAVVGAGLV LPLVHLLQNA EFDIKKEAAW
401: AISNATSGGS HEQIQYLVNQ GCIKPLCDLL ICPDPRIVTV CLEGLENILK ISEADKEMGL NGCALPVLRQ LIYLNDEEVL TDACWALSYL SDGPNDKIQA
501: VIQDGVCPRL VELLSHPSPT VLIPALRTVG NIVTGDDSQT QFIIDSGVLP HLYNLLTQNH KKSIKKEACW TISNITAGNQ AQIEAVVGAG LVLPLVHLLQ
601: NAEFDIKKEA AWAISNATSG GSHEQIQYLV NQGCIKPLCD LLICPDPRIV TVCLEGLENI LKISEADKEM GLNGGVNLYA QIIEESDGLD KIENLQSHDN
701: NEIYEKAVKI LERYWAEEED EEQILTDGGN ENPQQGFSFG NNQAAAPPGG FKFG

Best Arabidopsis Sequence Match ( AT1G09270.2 )
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA

Arabidopsis Description

IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.