Factsheet for Bra028852.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55698	Canola	cytosol, plastid	92.22	93.46
CDY04878	Canola	plastid	92.22	93.28
AT5G03070.1	Thale cress	cytosol, plastid	87.48	88.82
Bra009550.1-P	Field mustard	plastid	42.5	76.71
VIT_08s0040g02290.t01	Wine grape	cytosol	74.95	76.4
KRH19830	Soybean	cytosol, plastid	71.92	73.31
KRH32422	Soybean	plastid	27.51	72.14
PGSC0003DMT400027134	Potato	cytosol	69.45	70.38
Solyc10g084270.1.1	Tomato	cytosol	68.31	69.23
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	63.95	64.68
Zm00001d008640_P002	Maize	plastid	62.81	62.93
TraesCS3B01G152900.1	Wheat	plastid	60.72	61.07
HORVU3Hr1G025640.2	Barley	plastid	60.15	60.5
Os01t0158000-01	Rice	cytosol	59.96	59.85
EES02429	Sorghum	plastid	62.05	57.88
TraesCS3D01G135500.2	Wheat	plastid	60.53	56.76
TraesCS3A01G309900.2	Wheat	plastid	60.34	56.58
Bra012740.1-P	Field mustard	cytosol	8.54	28.48
Bra033534.1-P	Field mustard	cytosol	28.27	28.11
Bra038043.1-P	Field mustard	cytosol	28.08	27.72
Bra033342.1-P	Field mustard	cytosol	27.13	27.45
Bra018570.1-P	Field mustard	cytosol	27.89	27.12
Bra000891.1-P	Field mustard	cytosol	26.0	26.45
Bra008559.1-P	Field mustard	cytosol	26.57	26.37
Bra012741.1-P	Field mustard	cytosol	17.65	26.05
Bra020649.1-P	Field mustard	cytosol	24.67	24.44
Bra039416.1-P	Field mustard	cytosol	22.96	24.25
Bra030765.1-P	Field mustard	cytosol	27.7	19.36
Bra030771.1-P	Field mustard	cytosol	14.8	17.93

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	EnsemblPlantsGene:Bra028852
EnsemblPlants:Bra028852.1	EnsemblPlants:Bra028852.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006606
GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0061608	InterPro:IPR000225
InterPro:IPR011989	InterPro:Importing_su_alpha	UniProt:M4EJ86	PFAM:PF00514	PIRSF:PIRSF005673	PANTHER:PTHR23316
PANTHER:PTHR23316:SF1	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI00025436A9	SEG:seg	:

Description

AT5G03070 (E=3e-142) IMPA-9 | IMPA-9 (IMPORTIN ALPHA ISOFORM 9); binding

Coordinates

chrA02:-:1741939..1744507

Molecular Weight (calculated)

57661.6 Da

IEP (calculated)

5.077

GRAVY (calculated)

-0.091

Length

527 amino acids

Sequence
(BLAST)

001: MADDGSASNR RDPIKSSGDY FHSLRLLFHR EFDLADDSFS KVGNVAGQRR RQQAVTVAKE RRELLVRAKR LCRVGTNGGD DEDARVENEM MIDEEQPVLE
101: AQTVKAVEEL KSAVQSQGKG AMQKRVTALR ELRRLLSKSE FPPIDAALTA GAVPLLVQCL SFGSPDEQLL ESAWCLTNIA AGKPEETKAL LPALPLLIAH
201: LGEKSSAPVA EQCAWAIGNV AGEGEELRNV LLSQGALPPL ARMIFPDKGS TVRTAAWALS NLIKGPESKA AAQLVRVDGI VDAILRHLKK TDEEIATEIA
301: WIVVYLSALS DIATSMLLKG GILQLLVERL ATSNSLQLLI PYTDIPDQIS ENVINVLAKC LRSEHRVLKK EAAWVLSNIA AGSIEHKRMI HSSEAMPLLL
401: RLLSTSPFDI KKEVAYVLGN LCVESAEGGD ARPRIIQEHL VSIVSGGCLR GFIDLVRSPD IEAARLGLQF IELVLRGMPN GEGPKLVEGE DGIDAMERFQ
501: FHENEELRVM ANSLVDKYFG EDYGIDE

Best Arabidopsis Sequence Match ( AT5G03070.1 )
(BLAST)

001: MADDGSASNR RDPIKSSVGN VAGQRRRKQA VTVAKERREL LVRAKRLCRV GTNGDVEDAL VENEMMVDEE QPILEAQASK SVEELKSAVQ YQGKGAMQKR
101: VTALRELRRL LSKSEFPPVE AALRAGAIPL LVQCLSFGSP DEQLLESAWC LTNIAAGKPE ETKALLPALP LLIAHLGEKS SAPVAEQCAW AIGNVAGEGE
201: DLRNVLLSQG ALPPLARMIF PDKGSTVRTA AWALSNLIKG PESKAAAQLV KIDGILDAIL RHLKKTDEET ATEIAWIIVY LSALSDIATS MLLKGGILQL
301: LIDRLATSSS LQLLIPVLRS LGNFVAVDPK AVLTILIREQ NTEESIIGVL AKCLRSEHRV LKKEAAWVLS NIAAGSIEHK RMIHSTEVMP LLLRILSTSP
401: FDIRKEVAYV LGNLCVESAE GDRKPRIIQE HLVSIVSGGC LRGFIELVRS PDIEAARLGL QFIELVLRGM PNGEGPKLVE GEDGIDAMER FQFHENEELR
501: VMANSLVDKY FGEDYGIDE

Arabidopsis Description

IMPA9Importin subunit alpha-9 [Source:UniProtKB/Swiss-Prot;Acc:F4KF65]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.