Factsheet for GSMUA_Achr10P13130_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0040g02290.t01	Wine grape	cytosol	71.4	71.95
TraesCS3B01G152900.1	Wheat	plastid	70.44	70.04
Zm00001d008640_P002	Maize	plastid	70.63	69.96
HORVU3Hr1G025640.2	Barley	plastid	70.06	69.66
KRH19830	Soybean	cytosol, plastid	68.91	69.44
Os01t0158000-01	Rice	cytosol	70.25	69.32
PGSC0003DMT400027134	Potato	cytosol	68.14	68.27
Solyc10g084270.1.1	Tomato	cytosol	67.18	67.31
AT5G03070.1	Thale cress	cytosol, plastid	66.99	67.24
CDY04878	Canola	plastid	67.18	67.18
CDY55698	Canola	cytosol, plastid	66.6	66.73
EES02429	Sorghum	plastid	71.02	65.49
TraesCS3D01G135500.2	Wheat	plastid	70.63	65.48
TraesCS3A01G309900.2	Wheat	plastid	70.44	65.3
CDX70330	Canola	cytosol, extracellular	32.44	64.75
Bra028852.1-P	Field mustard	cytosol	64.68	63.95
CDY10407	Canola	cytosol	59.69	62.96
KRH32422	Soybean	plastid	24.18	62.69
Bra009550.1-P	Field mustard	plastid	34.55	61.64
GSMUA_Achr1P14770_001	Banana	cytosol	29.94	29.55
GSMUA_Achr8P06540_001	Banana	cytosol	29.37	28.81
GSMUA_Achr3P24150_001	Banana	cytosol	29.17	28.68
GSMUA_Achr5P27090_001	Banana	cytosol	28.98	27.71
GSMUA_Achr8P22290_001	Banana	cytosol	27.83	26.32
GSMUA_Achr5P27180_001	Banana	cytosol	18.43	20.73

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.3	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	GO:GO:0003674
GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006606	GO:GO:0006810	GO:GO:0008150
GO:GO:0008565	GO:GO:0015031	GO:GO:0061608	EnsemblPlantsGene:GSMUA_Achr10G13130_001	EnsemblPlants:GSMUA_Achr10P13130_001	EnsemblPlants:GSMUA_Achr10T13130_001
InterPro:IPR000225	InterPro:IPR011989	InterPro:Importing_su_alpha	UniProt:M0RHT9	PFAM:PF00514	PFAM:PF13513
PIRSF:PIRSF005673	PANTHER:PTHR23316	PANTHER:PTHR23316:SF1	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI000295896F
SEG:seg	:	:	:	:	:

Description

Importin subunit alpha-2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G13130_001]

Coordinates

chr10:-:21921315..21928492

Molecular Weight (calculated)

56732.8 Da

IEP (calculated)

5.937

GRAVY (calculated)

0.021

Length

521 amino acids

Sequence
(BLAST)

001: MADEDVSPQS SYHRNAIKTS VHNTSAQRRR QLAVAVGKER REALIRTKRL CREALFDDNE ASLEGNMNID EERAVLNAQA SQIIEDLKSA MTYQGKGAAQ
101: KKVEALRALR RLLSKSEIPP VKAALQAGAV PLLVQCLSFG SPDEQLLEAA WCLTNIAAGE PEETKSLVPA LPLLVAHLGE KSSVPVAEQC AWALGNVAGE
201: GDELRNILLA QGALLPLARL MMSDKGSTAR TASWALSNLI KGPQPNAATE LIRIKGVLDA IIQHLRNLDD ELATEVAWVI VYLSALSEAA VRLLVKSDVV
301: HLLVGKLASS ESLQLLIPVL RSLGNLVAAD SYMTDMVLVV GHNTTDQILL GLIKCLKSEH RVLKKEAAWV LSNIAAGSVG HKELIFSSEA TPLMIHLLSS
401: APFDIRKEVA YTLGNLCVAP AKNAEQPSII VHHLVALVNR ECISAFIHLV RSADIQSAKL GLQFLELVMR GMPNGEGPKL VEREDGIDAM ERFQFHENEE
501: MRNMANGLVD KYFGEDYGLD E

Best Arabidopsis Sequence Match ( AT5G03070.1 )
(BLAST)

001: MADDGSASNR RDPIKSSVGN VAGQRRRKQA VTVAKERREL LVRAKRLCRV GTNGDVEDAL VENEMMVDEE QPILEAQASK SVEELKSAVQ YQGKGAMQKR
101: VTALRELRRL LSKSEFPPVE AALRAGAIPL LVQCLSFGSP DEQLLESAWC LTNIAAGKPE ETKALLPALP LLIAHLGEKS SAPVAEQCAW AIGNVAGEGE
201: DLRNVLLSQG ALPPLARMIF PDKGSTVRTA AWALSNLIKG PESKAAAQLV KIDGILDAIL RHLKKTDEET ATEIAWIIVY LSALSDIATS MLLKGGILQL
301: LIDRLATSSS LQLLIPVLRS LGNFVAVDPK AVLTILIREQ NTEESIIGVL AKCLRSEHRV LKKEAAWVLS NIAAGSIEHK RMIHSTEVMP LLLRILSTSP
401: FDIRKEVAYV LGNLCVESAE GDRKPRIIQE HLVSIVSGGC LRGFIELVRS PDIEAARLGL QFIELVLRGM PNGEGPKLVE GEDGIDAMER FQFHENEELR
501: VMANSLVDKY FGEDYGIDE

Arabidopsis Description

IMPA9Importin subunit alpha-9 [Source:UniProtKB/Swiss-Prot;Acc:F4KF65]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.