Factsheet for GSMUA_Achr8P22290_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0060g00930.t01	Wine grape	cytosol	74.23	76.45
PGSC0003DMT400007130	Potato	cytosol	73.32	75.66
Solyc01g100720.2.1	Tomato	nucleus	72.96	75.28
GSMUA_Achr1P14770_001	Banana	cytosol	70.24	73.3
AT1G09270.1	Thale cress	cytosol	71.51	73.23
CDX94988	Canola	cytosol	71.32	72.78
CDX93514	Canola	cytosol	71.51	72.69
CDY31102	Canola	plasma membrane	71.51	72.69
GSMUA_Achr8P06540_001	Banana	cytosol	70.05	72.69
Bra018570.1-P	Field mustard	cytosol	71.32	72.51
CDY32165	Canola	cytosol	71.32	72.51
GSMUA_Achr3P24150_001	Banana	cytosol	69.69	72.45
GSMUA_Achr5P27090_001	Banana	cytosol	68.97	69.72
GSMUA_Achr5P27180_001	Banana	cytosol	46.82	55.72
Bra030765.1-P	Field mustard	cytosol	71.32	52.12
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	26.32	27.83

Protein Annotations

Gene3D:1.20.5.690	Gene3D:1.25.10.10	MapMan:23.5.1.3	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Arm_3
InterPro:Armadillo	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006606
GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0009605	GO:GO:0009607	GO:GO:0015031
GO:GO:0030581	GO:GO:0061608	GO:GO:0080034	EnsemblPlantsGene:GSMUA_Achr8G22290_001	EnsemblPlants:GSMUA_Achr8P22290_001	EnsemblPlants:GSMUA_Achr8T22290_001
InterPro:IPR000225	InterPro:IPR002652	InterPro:IPR011989	InterPro:IPR036975	InterPro:Importin-a_IBB	InterPro:Importin-a_IBB_sf
InterPro:Importing_su_alpha	UniProt:M0TSN2	PFAM:PF00514	PFAM:PF01749	PFAM:PF16186	PIRSF:PIRSF005673
PFscan:PS50176	PFscan:PS51214	PANTHER:PTHR23316	PANTHER:PTHR23316:SF35	SMART:SM00185	SUPFAM:SSF48371
UniParc:UPI0002967646	:	:	:	:	:

Description

Importin subunit alpha-1a [Source:GMGC_GENE;Acc:GSMUA_Achr8G22290_001]

Coordinates

chr8:-:26913705..26922136

Molecular Weight (calculated)

60753.7 Da

IEP (calculated)

5.308

GRAVY (calculated)

-0.229

Length

551 amino acids

Sequence
(BLAST)

001: MSLRPGTRAE VRKKSYKAGV DVDEGRRRRE GNLIEIRKSK REDSLTKKRR EVLLQAAQQA IGEPPALSPS GVDKKIENLQ GMVQGVWSEN PNTQLEATTQ
101: FRKLLSIERS PPIEEVIKAG VVPRFVEFLS RHDLPQLQFE AAWALTNVAS GTSEHTRVVI EHGAVPKFIE LLSSPNDDVR EQAVWALGNV AGDSPSCRDL
201: VLSHGALLPV MAQLNEYSKI SMLRNATWTL SNLCRGKPPA PFEQTKPAIQ ILRHLIHSSD EEVLTDACWA LSYLSDGTND KIQSVIETGV CPRLVELLLH
301: PSPTVLIPAL RTVGNIVTGD DSQTQLVIEK GALPCLFQLL TQSHKKSIKK EACWTISNIT AGNRAQIQAV IDANIISPLV HLLQHAEFDI KKEAAWAISN
401: ATSGSSNEQI HYLASQGCIK PLCDLLVCPD PRIVTVCLEG LENILKVGEI EKDLGKCGVN PYAQLIDECE GLDKIENLQG HDNNEIYEKT IKLLERYWVE
501: EEDEAQDALG STEGAEHSSE VAISQPSVPS VIDVGREIFC KILYQSFLSA A

Best Arabidopsis Sequence Match ( AT1G09270.2 )
(BLAST)

001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA

Arabidopsis Description

IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.