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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX94988 Canola cytosol 93.31 92.96
CDY32165 Canola cytosol 93.12 92.44
CDY31102 Canola plasma membrane 93.12 92.44
CDX93514 Canola cytosol 93.12 92.44
Bra018570.1-P Field mustard cytosol 92.94 92.25
VIT_14s0060g00930.t01 Wine grape cytosol 82.71 83.18
PGSC0003DMT400007130 Potato cytosol 81.6 82.21
Solyc01g100720.2.1 Tomato nucleus 81.41 82.02
AT3G06720.2 Thale cress cytosol 72.68 73.5
AT4G16143.2 Thale cress cytosol 72.12 72.52
GSMUA_Achr8P22290_001 Banana cytosol 73.23 71.51
Bra030765.1-P Field mustard cytosol 93.12 66.45
AT1G02690.2 Thale cress cytosol 66.54 66.42
AT4G02150.1 Thale cress cytosol 65.06 65.91
AT5G49310.1 Thale cress cytosol 58.92 61.08
KRG96699 Soybean cytosol 50.56 56.2
AT3G05720.1 Thale cress cytosol 54.46 55.49
KRG99893 Soybean cytosol 44.05 54.11
KRH68429 Soybean cytosol, plastid 52.23 53.83
KRG99898 Soybean cytosol 43.68 53.29
KRG99853 Soybean cytosol, plastid 47.96 52.76
KRG99895 Soybean cytosol, plastid 47.96 52.76
Os07t0688300-01 Rice cytosol 43.31 50.43
HORVU2Hr1G016300.1 Barley cytosol 42.57 50.22
AT5G52000.1 Thale cress cytosol 40.33 49.21
KRG99088 Soybean cytosol 39.41 47.64
AT1G32880.1 Thale cress cytosol 16.17 47.54
AT5G49305.2 Thale cress cytosol 33.64 47.14
KRG96700 Soybean cytosol 43.49 46.15
KXG36990 Sorghum cytosol 47.58 45.47
TraesCS2D01G096200.1 Wheat cytosol 47.4 45.21
TraesCS2A01G097100.1 Wheat cytosol 47.21 45.12
TraesCS2B01G112400.2 Wheat cytosol 47.21 45.04
Zm00001d022536_P008 Maize cytosol 46.1 43.66
AT5G03070.1 Thale cress cytosol, plastid 27.32 28.32
Protein Annotations
Gene3D:1.20.5.690Gene3D:1.25.10.10MapMan:23.5.1.3EntrezGene:837448UniProt:A0A178WMY7ProteinID:AAC24079.1
ProteinID:AEE28421.1ProteinID:AEE28422.1ProteinID:AEE28423.1EMBL:AF367284EMBL:AK316689InterPro:ARM-like
InterPro:ARM-type_foldArrayExpress:AT1G09270EnsemblPlantsGene:AT1G09270RefSeq:AT1G09270TAIR:AT1G09270RefSeq:AT1G09270-TAIR-G
EnsemblPlants:AT1G09270.1TAIR:AT1G09270.1EMBL:AY090944EMBL:AY117313InterPro:Arm_3InterPro:Armadillo
GO:GO:0003674GO:GO:0005215GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005576
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005635GO:GO:0005643GO:GO:0005654
GO:GO:0005737GO:GO:0005829GO:GO:0006606GO:GO:0006607GO:GO:0006810GO:GO:0008139
GO:GO:0008150GO:GO:0008565GO:GO:0009605GO:GO:0009607GO:GO:0015031GO:GO:0030581
GO:GO:0043657GO:GO:0061608GO:GO:0080034Symbol:IMPA-4InterPro:IPR000225InterPro:IPR002652
InterPro:IPR011989InterPro:IPR036975InterPro:Importin-a_IBBInterPro:Importin-a_IBB_sfInterPro:Importing_su_alphaRefSeq:NP_001031011.1
RefSeq:NP_172398.1RefSeq:NP_849623.1UniProt:O80480ProteinID:OAP19637.1PFAM:PF00514PFAM:PF01749
PFAM:PF16186PIRSF:PIRSF005673PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281PFscan:PS50176
PFscan:PS51214PANTHER:PTHR23316PANTHER:PTHR23316:SF22SMART:SM00185SUPFAM:SSF48371UniParc:UPI000009D0D5
EMBL:Y14616SEG:seg::::
Description
IMPA4Importin subunit alpha-4 [Source:UniProtKB/Swiss-Prot;Acc:O80480]
Coordinates
chr1:+:2994331..2998222
Molecular Weight (calculated)
59449.2 Da
IEP (calculated)
4.976
GRAVY (calculated)
-0.260
Length
538 amino acids
Sequence
(BLAST)
001: MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQLP LGAGLDGPQT AAAVEKRLEG IPMMVQGVYS DDPQAQLEAT
101: TQFRKLLSIE RSPPIDEVIK AGVIPRFVEF LGRHDHPQLQ FEAAWALTNV ASGTSDHTRV VIEQGAVPIF VKLLTSASDD VREQAVWALG NVAGDSPNCR
201: NLVLNYGALE PLLAQLNENS KLSMLRNATW TLSNFCRGKP PTPFEQVKPA LPILRQLIYL NDEEVLTDAC WALSYLSDGP NDKIQAVIEA GVCPRLVELL
301: GHQSPTVLIP ALRTVGNIVT GDDSQTQFII ESGVLPHLYN LLTQNHKKSI KKEACWTISN ITAGNKLQIE AVVGAGIILP LVHLLQNAEF DIKKEAAWAI
401: SNATSGGSHE QIQYLVTQGC IKPLCDLLIC PDPRIVTVCL EGLENILKVG EADKEMGLNS GVNLYAQIIE ESDGLDKVEN LQSHDNNEIY EKAVKILERY
501: WAEEEEEQIL QDGGNDNSQQ AFNFGNNPAA PVGGFKFA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.